Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV13-2A0A0B4J235 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV13-2A0A0B4J235 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV13-2A0A0B4J235 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV13-2A0A0B4J235 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV13-2A0A0B4J235 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV13-2A0A0B4J235 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV13-2A0A0B4J235 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV13-2A0A0B4J235 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV13-2A0A0B4J235 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRAV13-2A0A0B4J235 ST7-AS1-201ENST00000456775 1889 ntBASIC17.62■□□□□ 0.41
TRAV13-2A0A0B4J235 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-2A0A0B4J235 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV13-2A0A0B4J235 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-2A0A0B4J235 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV13-2A0A0B4J235 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV13-2A0A0B4J235 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV13-2A0A0B4J235 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV13-2A0A0B4J235 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV13-2A0A0B4J235 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV13-2A0A0B4J235 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV13-2A0A0B4J235 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAV13-2A0A0B4J235 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV13-2A0A0B4J235 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV13-2A0A0B4J235 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV13-2A0A0B4J235 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV13-2A0A0B4J235 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV13-2A0A0B4J235 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV13-2A0A0B4J235 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV13-2A0A0B4J235 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-2A0A0B4J235 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV13-2A0A0B4J235 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV13-2A0A0B4J235 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV13-2A0A0B4J235 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRAV13-2A0A0B4J235 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV13-2A0A0B4J235 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TRAV13-2A0A0B4J235 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV13-2A0A0B4J235 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRAV13-2A0A0B4J235 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV13-2A0A0B4J235 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRAV13-2A0A0B4J235 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.52■□□□□ 0.39
TRAV13-2A0A0B4J235 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV13-2A0A0B4J235 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV13-2A0A0B4J235 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV13-2A0A0B4J235 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV13-2A0A0B4J235 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAV13-2A0A0B4J235 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV13-2A0A0B4J235 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV13-2A0A0B4J235 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV13-2A0A0B4J235 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV13-2A0A0B4J235 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV13-2A0A0B4J235 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV13-2A0A0B4J235 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV13-2A0A0B4J235 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV13-2A0A0B4J235 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV13-2A0A0B4J235 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRAV13-2A0A0B4J235 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV13-2A0A0B4J235 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV13-2A0A0B4J235 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV13-2A0A0B4J235 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV13-2A0A0B4J235 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV13-2A0A0B4J235 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV13-2A0A0B4J235 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV13-2A0A0B4J235 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV13-2A0A0B4J235 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV13-2A0A0B4J235 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV13-2A0A0B4J235 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV13-2A0A0B4J235 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV13-2A0A0B4J235 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV13-2A0A0B4J235 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV13-2A0A0B4J235 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV13-2A0A0B4J235 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV13-2A0A0B4J235 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV13-2A0A0B4J235 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV13-2A0A0B4J235 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV13-2A0A0B4J235 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV13-2A0A0B4J235 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV13-2A0A0B4J235 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV13-2A0A0B4J235 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV13-2A0A0B4J235 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV13-2A0A0B4J235 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV13-2A0A0B4J235 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-2A0A0B4J235 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-2A0A0B4J235 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
TRAV13-2A0A0B4J235 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV13-2A0A0B4J235 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-2A0A0B4J235 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TRAV13-2A0A0B4J235 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV13-2A0A0B4J235 AL121749.1-202ENST00000609313 2153 ntBASIC17.38■□□□□ 0.37
TRAV13-2A0A0B4J235 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV13-2A0A0B4J235 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV13-2A0A0B4J235 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-2A0A0B4J235 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-2A0A0B4J235 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-2A0A0B4J235 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-2A0A0B4J235 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-2A0A0B4J235 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-2A0A0B4J235 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-2A0A0B4J235 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV13-2A0A0B4J235 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms