Protein–RNA interactions for Protein: A0A0B4J1U7

IGHV6-1, Immunoglobulin heavy variable 6-1, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV6-1A0A0B4J1U7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
IGHV6-1A0A0B4J1U7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IGHV6-1A0A0B4J1U7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC15.37■□□□□ 0.05
IGHV6-1A0A0B4J1U7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC15.37■□□□□ 0.05
IGHV6-1A0A0B4J1U7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC15.37■□□□□ 0.05
IGHV6-1A0A0B4J1U7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
IGHV6-1A0A0B4J1U7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC15.36■□□□□ 0.05
IGHV6-1A0A0B4J1U7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV6-1A0A0B4J1U7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV6-1A0A0B4J1U7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV6-1A0A0B4J1U7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV6-1A0A0B4J1U7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV6-1A0A0B4J1U7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV6-1A0A0B4J1U7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
IGHV6-1A0A0B4J1U7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IGHV6-1A0A0B4J1U7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
IGHV6-1A0A0B4J1U7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV6-1A0A0B4J1U7 MVK-208ENST00000539696 608 ntTSL 5 BASIC15.32■□□□□ 0.04
IGHV6-1A0A0B4J1U7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV6-1A0A0B4J1U7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
IGHV6-1A0A0B4J1U7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IGHV6-1A0A0B4J1U7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC15.31■□□□□ 0.04
IGHV6-1A0A0B4J1U7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV6-1A0A0B4J1U7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV6-1A0A0B4J1U7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IGHV6-1A0A0B4J1U7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV6-1A0A0B4J1U7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC15.3■□□□□ 0.04
IGHV6-1A0A0B4J1U7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IGHV6-1A0A0B4J1U7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV6-1A0A0B4J1U7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC15.29■□□□□ 0.04
IGHV6-1A0A0B4J1U7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
IGHV6-1A0A0B4J1U7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGHV6-1A0A0B4J1U7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV6-1A0A0B4J1U7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGHV6-1A0A0B4J1U7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
IGHV6-1A0A0B4J1U7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
IGHV6-1A0A0B4J1U7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC15.27■□□□□ 0.03
IGHV6-1A0A0B4J1U7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGHV6-1A0A0B4J1U7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IGHV6-1A0A0B4J1U7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC15.26■□□□□ 0.03
IGHV6-1A0A0B4J1U7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
IGHV6-1A0A0B4J1U7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV6-1A0A0B4J1U7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV6-1A0A0B4J1U7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC15.25■□□□□ 0.03
IGHV6-1A0A0B4J1U7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IGHV6-1A0A0B4J1U7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV6-1A0A0B4J1U7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV6-1A0A0B4J1U7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IGHV6-1A0A0B4J1U7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC15.24■□□□□ 0.03
IGHV6-1A0A0B4J1U7 AL161658.1-201ENST00000623641 1967 ntBASIC15.24■□□□□ 0.03
IGHV6-1A0A0B4J1U7 ST7-AS1-201ENST00000456775 1889 ntBASIC15.23■□□□□ 0.03
IGHV6-1A0A0B4J1U7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
IGHV6-1A0A0B4J1U7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC15.23■□□□□ 0.03
IGHV6-1A0A0B4J1U7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV6-1A0A0B4J1U7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV6-1A0A0B4J1U7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IGHV6-1A0A0B4J1U7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IGHV6-1A0A0B4J1U7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV6-1A0A0B4J1U7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IGHV6-1A0A0B4J1U7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IGHV6-1A0A0B4J1U7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IGHV6-1A0A0B4J1U7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV6-1A0A0B4J1U7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV6-1A0A0B4J1U7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV6-1A0A0B4J1U7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV6-1A0A0B4J1U7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IGHV6-1A0A0B4J1U7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV6-1A0A0B4J1U7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV6-1A0A0B4J1U7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV6-1A0A0B4J1U7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV6-1A0A0B4J1U7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV6-1A0A0B4J1U7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC15.19■□□□□ 0.02
IGHV6-1A0A0B4J1U7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV6-1A0A0B4J1U7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV6-1A0A0B4J1U7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV6-1A0A0B4J1U7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV6-1A0A0B4J1U7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC15.17■□□□□ 0.02
IGHV6-1A0A0B4J1U7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV6-1A0A0B4J1U7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV6-1A0A0B4J1U7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV6-1A0A0B4J1U7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV6-1A0A0B4J1U7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV6-1A0A0B4J1U7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC15.16■□□□□ 0.02
IGHV6-1A0A0B4J1U7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC15.16■□□□□ 0.02
IGHV6-1A0A0B4J1U7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IGHV6-1A0A0B4J1U7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGHV6-1A0A0B4J1U7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IGHV6-1A0A0B4J1U7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IGHV6-1A0A0B4J1U7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IGHV6-1A0A0B4J1U7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IGHV6-1A0A0B4J1U7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGHV6-1A0A0B4J1U7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV6-1A0A0B4J1U7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV6-1A0A0B4J1U7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC15.14■□□□□ 0.01
IGHV6-1A0A0B4J1U7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGHV6-1A0A0B4J1U7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV6-1A0A0B4J1U7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV6-1A0A0B4J1U7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV6-1A0A0B4J1U7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGHV6-1A0A0B4J1U7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms