Protein–RNA interactions for Protein: Q9Y572

RIPK3, Receptor-interacting serine/threonine-protein kinase 3, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3Q9Y572 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
RIPK3Q9Y572 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RIPK3Q9Y572 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
RIPK3Q9Y572 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
RIPK3Q9Y572 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RIPK3Q9Y572 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
RIPK3Q9Y572 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
RIPK3Q9Y572 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
RIPK3Q9Y572 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.4■■■□□ 2.62
RIPK3Q9Y572 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.39■■■□□ 2.62
RIPK3Q9Y572 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.39■■■□□ 2.62
RIPK3Q9Y572 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.38■■■□□ 2.61
RIPK3Q9Y572 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
RIPK3Q9Y572 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.36■■■□□ 2.61
RIPK3Q9Y572 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RIPK3Q9Y572 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
RIPK3Q9Y572 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RIPK3Q9Y572 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIPK3Q9Y572 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIPK3Q9Y572 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIPK3Q9Y572 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RIPK3Q9Y572 ABHD17AP4-201ENST00000411545 909 ntBASIC31.32■■■□□ 2.6
RIPK3Q9Y572 AC044849.2-201ENST00000606596 710 ntBASIC31.32■■■□□ 2.6
RIPK3Q9Y572 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RIPK3Q9Y572 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RIPK3Q9Y572 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.3■■■□□ 2.6
RIPK3Q9Y572 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RIPK3Q9Y572 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RIPK3Q9Y572 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RIPK3Q9Y572 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RIPK3Q9Y572 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RIPK3Q9Y572 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RIPK3Q9Y572 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RIPK3Q9Y572 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RIPK3Q9Y572 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.26■■■□□ 2.59
RIPK3Q9Y572 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RIPK3Q9Y572 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RIPK3Q9Y572 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.24■■■□□ 2.59
RIPK3Q9Y572 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RIPK3Q9Y572 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RIPK3Q9Y572 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RIPK3Q9Y572 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RIPK3Q9Y572 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.21■■■□□ 2.59
RIPK3Q9Y572 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.2■■■□□ 2.59
RIPK3Q9Y572 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.2■■■□□ 2.59
RIPK3Q9Y572 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RIPK3Q9Y572 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RIPK3Q9Y572 MIR7108-201ENST00000614319 87 ntBASIC31.19■■■□□ 2.58
RIPK3Q9Y572 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RIPK3Q9Y572 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RIPK3Q9Y572 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
RIPK3Q9Y572 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
RIPK3Q9Y572 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.16■■■□□ 2.58
RIPK3Q9Y572 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RIPK3Q9Y572 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RIPK3Q9Y572 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RIPK3Q9Y572 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RIPK3Q9Y572 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
RIPK3Q9Y572 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.12■■■□□ 2.57
RIPK3Q9Y572 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
RIPK3Q9Y572 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RIPK3Q9Y572 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.11■■■□□ 2.57
RIPK3Q9Y572 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
RIPK3Q9Y572 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RIPK3Q9Y572 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RIPK3Q9Y572 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.09■■■□□ 2.57
RIPK3Q9Y572 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.08■■■□□ 2.57
RIPK3Q9Y572 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RIPK3Q9Y572 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.08■■■□□ 2.57
RIPK3Q9Y572 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RIPK3Q9Y572 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.06■■■□□ 2.56
RIPK3Q9Y572 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.05■■■□□ 2.56
RIPK3Q9Y572 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.05■■■□□ 2.56
RIPK3Q9Y572 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RIPK3Q9Y572 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIPK3Q9Y572 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIPK3Q9Y572 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.04■■■□□ 2.56
RIPK3Q9Y572 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.04■■■□□ 2.56
RIPK3Q9Y572 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RIPK3Q9Y572 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.03■■■□□ 2.56
RIPK3Q9Y572 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.03■■■□□ 2.56
RIPK3Q9Y572 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.02■■■□□ 2.56
RIPK3Q9Y572 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
RIPK3Q9Y572 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.56
RIPK3Q9Y572 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.01■■■□□ 2.56
RIPK3Q9Y572 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RIPK3Q9Y572 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RIPK3Q9Y572 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
RIPK3Q9Y572 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RIPK3Q9Y572 ZNRF2P2-203ENST00000454624 420 ntBASIC30.99■■■□□ 2.55
RIPK3Q9Y572 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.99■■■□□ 2.55
RIPK3Q9Y572 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
RIPK3Q9Y572 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
RIPK3Q9Y572 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RIPK3Q9Y572 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.98■■■□□ 2.55
RIPK3Q9Y572 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
RIPK3Q9Y572 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RIPK3Q9Y572 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
RIPK3Q9Y572 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.93■■■□□ 2.54
RIPK3Q9Y572 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms