Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
RTCBQ9Y3I0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
RTCBQ9Y3I0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC35.22■■■■□ 3.23
RTCBQ9Y3I0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC35.22■■■■□ 3.23
RTCBQ9Y3I0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
RTCBQ9Y3I0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC35.19■■■■□ 3.22
RTCBQ9Y3I0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC35.19■■■■□ 3.22
RTCBQ9Y3I0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC35.19■■■■□ 3.22
RTCBQ9Y3I0 WASH5P-204ENST00000632292 975 ntBASIC35.19■■■■□ 3.22
RTCBQ9Y3I0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC35.17■■■■□ 3.22
RTCBQ9Y3I0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
RTCBQ9Y3I0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
RTCBQ9Y3I0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
RTCBQ9Y3I0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC35.15■■■■□ 3.22
RTCBQ9Y3I0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
RTCBQ9Y3I0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
RTCBQ9Y3I0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
RTCBQ9Y3I0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC35.13■■■■□ 3.21
RTCBQ9Y3I0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC35.12■■■■□ 3.21
RTCBQ9Y3I0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
RTCBQ9Y3I0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
RTCBQ9Y3I0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC35.08■■■■□ 3.21
RTCBQ9Y3I0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC35.08■■■■□ 3.21
RTCBQ9Y3I0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC35.08■■■■□ 3.21
RTCBQ9Y3I0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
RTCBQ9Y3I0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC35.06■■■■□ 3.2
RTCBQ9Y3I0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC35.05■■■■□ 3.2
RTCBQ9Y3I0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
RTCBQ9Y3I0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
RTCBQ9Y3I0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
RTCBQ9Y3I0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC35.04■■■■□ 3.2
RTCBQ9Y3I0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC35.03■■■■□ 3.2
RTCBQ9Y3I0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
RTCBQ9Y3I0 DUX4L29-201ENST00000425409 679 ntBASIC35.01■■■■□ 3.2
RTCBQ9Y3I0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC34.98■■■■□ 3.19
RTCBQ9Y3I0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
RTCBQ9Y3I0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
RTCBQ9Y3I0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC34.97■■■■□ 3.19
RTCBQ9Y3I0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC34.96■■■■□ 3.19
RTCBQ9Y3I0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
RTCBQ9Y3I0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC34.95■■■■□ 3.19
RTCBQ9Y3I0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
RTCBQ9Y3I0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
RTCBQ9Y3I0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC34.92■■■■□ 3.18
RTCBQ9Y3I0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
RTCBQ9Y3I0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
RTCBQ9Y3I0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
RTCBQ9Y3I0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
RTCBQ9Y3I0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
RTCBQ9Y3I0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
RTCBQ9Y3I0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
RTCBQ9Y3I0 MIR4449-201ENST00000578365 66 ntBASIC34.87■■■■□ 3.17
RTCBQ9Y3I0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
RTCBQ9Y3I0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC34.85■■■■□ 3.17
RTCBQ9Y3I0 AC021231.2-201ENST00000594613 730 ntBASIC34.85■■■■□ 3.17
RTCBQ9Y3I0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
RTCBQ9Y3I0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC34.82■■■■□ 3.16
RTCBQ9Y3I0 MIR639-201ENST00000384974 98 ntBASIC34.81■■■■□ 3.16
RTCBQ9Y3I0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
RTCBQ9Y3I0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
RTCBQ9Y3I0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
RTCBQ9Y3I0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC34.79■■■■□ 3.16
RTCBQ9Y3I0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
RTCBQ9Y3I0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC34.77■■■■□ 3.16
RTCBQ9Y3I0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
RTCBQ9Y3I0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
RTCBQ9Y3I0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC34.72■■■■□ 3.15
RTCBQ9Y3I0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC34.72■■■■□ 3.15
RTCBQ9Y3I0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
RTCBQ9Y3I0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC34.71■■■■□ 3.15
RTCBQ9Y3I0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC34.69■■■■□ 3.14
RTCBQ9Y3I0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
RTCBQ9Y3I0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC34.66■■■■□ 3.14
RTCBQ9Y3I0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
RTCBQ9Y3I0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
RTCBQ9Y3I0 AC108673.1-201ENST00000510422 1159 ntBASIC34.64■■■■□ 3.14
RTCBQ9Y3I0 MIR3648-2-201ENST00000581792 180 ntBASIC34.64■■■■□ 3.14
RTCBQ9Y3I0 MIR3648-1-201ENST00000615959 180 ntBASIC34.64■■■■□ 3.14
RTCBQ9Y3I0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
RTCBQ9Y3I0 AC016575.1-201ENST00000607026 382 ntBASIC34.63■■■■□ 3.13
RTCBQ9Y3I0 MIR6090-201ENST00000622481 60 ntBASIC34.63■■■■□ 3.13
RTCBQ9Y3I0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RTCBQ9Y3I0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC34.62■■■■□ 3.13
RTCBQ9Y3I0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC34.62■■■■□ 3.13
RTCBQ9Y3I0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
RTCBQ9Y3I0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
RTCBQ9Y3I0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC34.61■■■■□ 3.13
RTCBQ9Y3I0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
RTCBQ9Y3I0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC34.6■■■■□ 3.13
RTCBQ9Y3I0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC34.59■■■■□ 3.13
RTCBQ9Y3I0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RTCBQ9Y3I0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC34.59■■■■□ 3.13
RTCBQ9Y3I0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RTCBQ9Y3I0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
RTCBQ9Y3I0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
RTCBQ9Y3I0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC34.56■■■■□ 3.12
RTCBQ9Y3I0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC34.55■■■■□ 3.12
RTCBQ9Y3I0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
RTCBQ9Y3I0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
RTCBQ9Y3I0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC34.53■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms