Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
TFCP2L1Q9NZI6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC35.51■■■■□ 3.28
TFCP2L1Q9NZI6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.5■■■■□ 3.27
TFCP2L1Q9NZI6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
TFCP2L1Q9NZI6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC35.47■■■■□ 3.27
TFCP2L1Q9NZI6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
TFCP2L1Q9NZI6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC35.45■■■■□ 3.27
TFCP2L1Q9NZI6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
TFCP2L1Q9NZI6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC35.44■■■■□ 3.26
TFCP2L1Q9NZI6 DUX4L29-201ENST00000425409 679 ntBASIC35.44■■■■□ 3.26
TFCP2L1Q9NZI6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC35.43■■■■□ 3.26
TFCP2L1Q9NZI6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
TFCP2L1Q9NZI6 MIR639-201ENST00000384974 98 ntBASIC35.41■■■■□ 3.26
TFCP2L1Q9NZI6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
TFCP2L1Q9NZI6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
TFCP2L1Q9NZI6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
TFCP2L1Q9NZI6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
TFCP2L1Q9NZI6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC35.36■■■■□ 3.25
TFCP2L1Q9NZI6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
TFCP2L1Q9NZI6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC35.34■■■■□ 3.25
TFCP2L1Q9NZI6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC35.34■■■■□ 3.25
TFCP2L1Q9NZI6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.33■■■■□ 3.25
TFCP2L1Q9NZI6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
TFCP2L1Q9NZI6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC35.3■■■■□ 3.24
TFCP2L1Q9NZI6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
TFCP2L1Q9NZI6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
TFCP2L1Q9NZI6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC35.29■■■■□ 3.24
TFCP2L1Q9NZI6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC35.29■■■■□ 3.24
TFCP2L1Q9NZI6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
TFCP2L1Q9NZI6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
TFCP2L1Q9NZI6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC35.25■■■■□ 3.23
TFCP2L1Q9NZI6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC35.25■■■■□ 3.23
TFCP2L1Q9NZI6 AC021231.2-201ENST00000594613 730 ntBASIC35.24■■■■□ 3.23
TFCP2L1Q9NZI6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC35.24■■■■□ 3.23
TFCP2L1Q9NZI6 WASH5P-204ENST00000632292 975 ntBASIC35.24■■■■□ 3.23
TFCP2L1Q9NZI6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC35.23■■■■□ 3.23
TFCP2L1Q9NZI6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
TFCP2L1Q9NZI6 HSD17B1P1-201ENST00000590052 955 ntBASIC35.22■■■■□ 3.23
TFCP2L1Q9NZI6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
TFCP2L1Q9NZI6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC35.19■■■■□ 3.22
TFCP2L1Q9NZI6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
TFCP2L1Q9NZI6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
TFCP2L1Q9NZI6 AC016575.1-201ENST00000607026 382 ntBASIC35.17■■■■□ 3.22
TFCP2L1Q9NZI6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
TFCP2L1Q9NZI6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.16■■■■□ 3.22
TFCP2L1Q9NZI6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC35.15■■■■□ 3.22
TFCP2L1Q9NZI6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.14■■■■□ 3.22
TFCP2L1Q9NZI6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC35.14■■■■□ 3.22
TFCP2L1Q9NZI6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC35.14■■■■□ 3.22
TFCP2L1Q9NZI6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
TFCP2L1Q9NZI6 MIR3648-2-201ENST00000581792 180 ntBASIC35.14■■■■□ 3.22
TFCP2L1Q9NZI6 MIR3648-1-201ENST00000615959 180 ntBASIC35.14■■■■□ 3.22
TFCP2L1Q9NZI6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC35.13■■■■□ 3.21
TFCP2L1Q9NZI6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC35.12■■■■□ 3.21
TFCP2L1Q9NZI6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC35.12■■■■□ 3.21
TFCP2L1Q9NZI6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC35.11■■■■□ 3.21
TFCP2L1Q9NZI6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
TFCP2L1Q9NZI6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC35.08■■■■□ 3.21
TFCP2L1Q9NZI6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC35.08■■■■□ 3.21
TFCP2L1Q9NZI6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
TFCP2L1Q9NZI6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
TFCP2L1Q9NZI6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
TFCP2L1Q9NZI6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
TFCP2L1Q9NZI6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
TFCP2L1Q9NZI6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC35.03■■■■□ 3.2
TFCP2L1Q9NZI6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC35.03■■■■□ 3.2
TFCP2L1Q9NZI6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC35.01■■■■□ 3.2
TFCP2L1Q9NZI6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC35■■■■□ 3.19
TFCP2L1Q9NZI6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
TFCP2L1Q9NZI6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
TFCP2L1Q9NZI6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
TFCP2L1Q9NZI6 ABHD17AP3-201ENST00000503096 1137 ntBASIC34.94■■■■□ 3.18
TFCP2L1Q9NZI6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC34.93■■■■□ 3.18
TFCP2L1Q9NZI6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC34.93■■■■□ 3.18
TFCP2L1Q9NZI6 DUX4L11-201ENST00000611504 1267 ntBASIC34.92■■■■□ 3.18
TFCP2L1Q9NZI6 DUX4L12-201ENST00000614593 1267 ntBASIC34.92■■■■□ 3.18
TFCP2L1Q9NZI6 DUX4L14-201ENST00000621227 1267 ntBASIC34.92■■■■□ 3.18
TFCP2L1Q9NZI6 CR559946.2-201ENST00000623684 991 ntBASIC34.92■■■■□ 3.18
TFCP2L1Q9NZI6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
TFCP2L1Q9NZI6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC34.91■■■■□ 3.18
TFCP2L1Q9NZI6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
TFCP2L1Q9NZI6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
TFCP2L1Q9NZI6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC34.9■■■■□ 3.18
TFCP2L1Q9NZI6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
TFCP2L1Q9NZI6 MIR6090-201ENST00000622481 60 ntBASIC34.88■■■■□ 3.17
TFCP2L1Q9NZI6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC34.88■■■■□ 3.17
TFCP2L1Q9NZI6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC34.87■■■■□ 3.17
TFCP2L1Q9NZI6 AC108673.1-201ENST00000510422 1159 ntBASIC34.87■■■■□ 3.17
TFCP2L1Q9NZI6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
TFCP2L1Q9NZI6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
TFCP2L1Q9NZI6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
TFCP2L1Q9NZI6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
TFCP2L1Q9NZI6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC34.85■■■■□ 3.17
TFCP2L1Q9NZI6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC34.85■■■■□ 3.17
TFCP2L1Q9NZI6 LINC01971-201ENST00000617888 1048 ntBASIC34.85■■■■□ 3.17
TFCP2L1Q9NZI6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
TFCP2L1Q9NZI6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
TFCP2L1Q9NZI6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
TFCP2L1Q9NZI6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
TFCP2L1Q9NZI6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms