Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ATXN3LQ9H3M9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ATXN3LQ9H3M9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.62■■■□□ 2.17
ATXN3LQ9H3M9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ATXN3LQ9H3M9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
ATXN3LQ9H3M9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ATXN3LQ9H3M9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
ATXN3LQ9H3M9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.61■■■□□ 2.17
ATXN3LQ9H3M9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.61■■■□□ 2.17
ATXN3LQ9H3M9 AC087741.3-201ENST00000624270 1347 ntBASIC28.61■■■□□ 2.17
ATXN3LQ9H3M9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.6■■■□□ 2.17
ATXN3LQ9H3M9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ATXN3LQ9H3M9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.59■■■□□ 2.17
ATXN3LQ9H3M9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ATXN3LQ9H3M9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.58■■■□□ 2.17
ATXN3LQ9H3M9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ATXN3LQ9H3M9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
ATXN3LQ9H3M9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ATXN3LQ9H3M9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.55■■■□□ 2.16
ATXN3LQ9H3M9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
ATXN3LQ9H3M9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
ATXN3LQ9H3M9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
ATXN3LQ9H3M9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
ATXN3LQ9H3M9 AC044849.2-201ENST00000606596 710 ntBASIC28.5■■■□□ 2.15
ATXN3LQ9H3M9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
ATXN3LQ9H3M9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ATXN3LQ9H3M9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ATXN3LQ9H3M9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
ATXN3LQ9H3M9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.46■■■□□ 2.15
ATXN3LQ9H3M9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
ATXN3LQ9H3M9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.44■■■□□ 2.14
ATXN3LQ9H3M9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ATXN3LQ9H3M9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.42■■■□□ 2.14
ATXN3LQ9H3M9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
ATXN3LQ9H3M9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.42■■■□□ 2.14
ATXN3LQ9H3M9 ABHD17AP4-201ENST00000411545 909 ntBASIC28.42■■■□□ 2.14
ATXN3LQ9H3M9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.42■■■□□ 2.14
ATXN3LQ9H3M9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ATXN3LQ9H3M9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
ATXN3LQ9H3M9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ATXN3LQ9H3M9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ATXN3LQ9H3M9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.4■■■□□ 2.14
ATXN3LQ9H3M9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.4■■■□□ 2.14
ATXN3LQ9H3M9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ATXN3LQ9H3M9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ATXN3LQ9H3M9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ATXN3LQ9H3M9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.38■■■□□ 2.13
ATXN3LQ9H3M9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ATXN3LQ9H3M9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.37■■■□□ 2.13
ATXN3LQ9H3M9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ATXN3LQ9H3M9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
ATXN3LQ9H3M9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.36■■■□□ 2.13
ATXN3LQ9H3M9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ATXN3LQ9H3M9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ATXN3LQ9H3M9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ATXN3LQ9H3M9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.34■■■□□ 2.13
ATXN3LQ9H3M9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATXN3LQ9H3M9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATXN3LQ9H3M9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATXN3LQ9H3M9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATXN3LQ9H3M9 MIR7108-201ENST00000614319 87 ntBASIC28.32■■■□□ 2.12
ATXN3LQ9H3M9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATXN3LQ9H3M9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
ATXN3LQ9H3M9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ATXN3LQ9H3M9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ATXN3LQ9H3M9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.31■■■□□ 2.12
ATXN3LQ9H3M9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATXN3LQ9H3M9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ATXN3LQ9H3M9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.3■■■□□ 2.12
ATXN3LQ9H3M9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ATXN3LQ9H3M9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATXN3LQ9H3M9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATXN3LQ9H3M9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
ATXN3LQ9H3M9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
ATXN3LQ9H3M9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.26■■■□□ 2.11
ATXN3LQ9H3M9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATXN3LQ9H3M9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.24■■■□□ 2.11
ATXN3LQ9H3M9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATXN3LQ9H3M9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATXN3LQ9H3M9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.23■■■□□ 2.11
ATXN3LQ9H3M9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.23■■■□□ 2.11
ATXN3LQ9H3M9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATXN3LQ9H3M9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ATXN3LQ9H3M9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ATXN3LQ9H3M9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATXN3LQ9H3M9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATXN3LQ9H3M9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.21■■■□□ 2.11
ATXN3LQ9H3M9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.21■■■□□ 2.11
ATXN3LQ9H3M9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATXN3LQ9H3M9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ATXN3LQ9H3M9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ATXN3LQ9H3M9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.18■■■□□ 2.1
ATXN3LQ9H3M9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.17■■■□□ 2.1
ATXN3LQ9H3M9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
ATXN3LQ9H3M9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATXN3LQ9H3M9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.17■■■□□ 2.1
ATXN3LQ9H3M9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.17■■■□□ 2.1
ATXN3LQ9H3M9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ATXN3LQ9H3M9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.17■■■□□ 2.1
ATXN3LQ9H3M9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms