Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK3BQ9BT76 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK3BQ9BT76 AP006261.1-201ENST00000584783 668 ntBASIC18.7■□□□□ 0.58
UPK3BQ9BT76 WASH5P-204ENST00000632292 975 ntBASIC18.7■□□□□ 0.58
UPK3BQ9BT76 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK3BQ9BT76 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK3BQ9BT76 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.69■□□□□ 0.58
UPK3BQ9BT76 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.68■□□□□ 0.58
UPK3BQ9BT76 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK3BQ9BT76 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.68■□□□□ 0.58
UPK3BQ9BT76 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.68■□□□□ 0.58
UPK3BQ9BT76 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK3BQ9BT76 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK3BQ9BT76 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3BQ9BT76 AL161658.1-201ENST00000623641 1967 ntBASIC18.65■□□□□ 0.58
UPK3BQ9BT76 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK3BQ9BT76 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK3BQ9BT76 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK3BQ9BT76 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3BQ9BT76 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3BQ9BT76 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK3BQ9BT76 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3BQ9BT76 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
UPK3BQ9BT76 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK3BQ9BT76 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK3BQ9BT76 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
UPK3BQ9BT76 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.6■□□□□ 0.57
UPK3BQ9BT76 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
UPK3BQ9BT76 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3BQ9BT76 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.59■□□□□ 0.57
UPK3BQ9BT76 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3BQ9BT76 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK3BQ9BT76 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
UPK3BQ9BT76 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3BQ9BT76 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK3BQ9BT76 MIR3665-201ENST00000578708 105 ntBASIC18.58■□□□□ 0.56
UPK3BQ9BT76 AL162393.1-201ENST00000437852 946 ntBASIC18.57■□□□□ 0.56
UPK3BQ9BT76 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3BQ9BT76 MIR762-201ENST00000390236 83 ntBASIC18.56■□□□□ 0.56
UPK3BQ9BT76 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK3BQ9BT76 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3BQ9BT76 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK3BQ9BT76 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.55■□□□□ 0.56
UPK3BQ9BT76 RPS2P35-201ENST00000443417 897 ntBASIC18.55■□□□□ 0.56
UPK3BQ9BT76 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.55■□□□□ 0.56
UPK3BQ9BT76 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.55■□□□□ 0.56
UPK3BQ9BT76 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.55■□□□□ 0.56
UPK3BQ9BT76 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3BQ9BT76 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.54■□□□□ 0.56
UPK3BQ9BT76 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPK3BQ9BT76 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3BQ9BT76 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK3BQ9BT76 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK3BQ9BT76 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.52■□□□□ 0.56
UPK3BQ9BT76 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK3BQ9BT76 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK3BQ9BT76 AC005559.1-201ENST00000589661 871 ntBASIC18.51■□□□□ 0.55
UPK3BQ9BT76 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.51■□□□□ 0.55
UPK3BQ9BT76 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3BQ9BT76 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3BQ9BT76 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3BQ9BT76 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
UPK3BQ9BT76 AC120057.4-201ENST00000624722 1615 ntBASIC18.49■□□□□ 0.55
UPK3BQ9BT76 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UPK3BQ9BT76 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3BQ9BT76 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3BQ9BT76 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3BQ9BT76 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK3BQ9BT76 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK3BQ9BT76 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3BQ9BT76 DUX4L28-201ENST00000623687 678 ntBASIC18.47■□□□□ 0.55
UPK3BQ9BT76 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC18.46■□□□□ 0.55
UPK3BQ9BT76 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK3BQ9BT76 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
UPK3BQ9BT76 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPK3BQ9BT76 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK3BQ9BT76 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.45■□□□□ 0.54
UPK3BQ9BT76 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK3BQ9BT76 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
UPK3BQ9BT76 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPK3BQ9BT76 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPK3BQ9BT76 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPK3BQ9BT76 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPK3BQ9BT76 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK3BQ9BT76 AC087741.3-201ENST00000624270 1347 ntBASIC18.43■□□□□ 0.54
UPK3BQ9BT76 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.43■□□□□ 0.54
UPK3BQ9BT76 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.42■□□□□ 0.54
UPK3BQ9BT76 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK3BQ9BT76 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.42■□□□□ 0.54
UPK3BQ9BT76 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.42■□□□□ 0.54
UPK3BQ9BT76 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.41■□□□□ 0.54
UPK3BQ9BT76 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPK3BQ9BT76 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
UPK3BQ9BT76 AC044849.2-201ENST00000606596 710 ntBASIC18.41■□□□□ 0.54
UPK3BQ9BT76 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3BQ9BT76 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3BQ9BT76 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3BQ9BT76 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
UPK3BQ9BT76 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
UPK3BQ9BT76 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms