Protein–RNA interactions for Protein: Q96EH5

RPL39L, 60S ribosomal protein L39-like, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39LQ96EH5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPL39LQ96EH5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.52■□□□□ 0.72
RPL39LQ96EH5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPL39LQ96EH5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPL39LQ96EH5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RPL39LQ96EH5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPL39LQ96EH5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL39LQ96EH5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPL39LQ96EH5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPL39LQ96EH5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RPL39LQ96EH5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPL39LQ96EH5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPL39LQ96EH5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RPL39LQ96EH5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPL39LQ96EH5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.47■□□□□ 0.71
RPL39LQ96EH5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL39LQ96EH5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL39LQ96EH5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPL39LQ96EH5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.45■□□□□ 0.7
RPL39LQ96EH5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL39LQ96EH5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RPL39LQ96EH5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RPL39LQ96EH5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL39LQ96EH5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL39LQ96EH5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL39LQ96EH5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL39LQ96EH5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL39LQ96EH5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL39LQ96EH5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPL39LQ96EH5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL39LQ96EH5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL39LQ96EH5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.4■□□□□ 0.7
RPL39LQ96EH5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.4■□□□□ 0.7
RPL39LQ96EH5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPL39LQ96EH5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPL39LQ96EH5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPL39LQ96EH5 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.38■□□□□ 0.69
RPL39LQ96EH5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPL39LQ96EH5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL39LQ96EH5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL39LQ96EH5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPL39LQ96EH5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL39LQ96EH5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RPL39LQ96EH5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.35■□□□□ 0.69
RPL39LQ96EH5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL39LQ96EH5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL39LQ96EH5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPL39LQ96EH5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RPL39LQ96EH5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.32■□□□□ 0.68
RPL39LQ96EH5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RPL39LQ96EH5 ST7-AS1-201ENST00000456775 1889 ntBASIC19.32■□□□□ 0.68
RPL39LQ96EH5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL39LQ96EH5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL39LQ96EH5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL39LQ96EH5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL39LQ96EH5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPL39LQ96EH5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL39LQ96EH5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL39LQ96EH5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RPL39LQ96EH5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPL39LQ96EH5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL39LQ96EH5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.28■□□□□ 0.68
RPL39LQ96EH5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.27■□□□□ 0.68
RPL39LQ96EH5 AL161658.1-201ENST00000623641 1967 ntBASIC19.26■□□□□ 0.67
RPL39LQ96EH5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.26■□□□□ 0.67
RPL39LQ96EH5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.26■□□□□ 0.67
RPL39LQ96EH5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPL39LQ96EH5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL39LQ96EH5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.25■□□□□ 0.67
RPL39LQ96EH5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL39LQ96EH5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL39LQ96EH5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RPL39LQ96EH5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPL39LQ96EH5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RPL39LQ96EH5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL39LQ96EH5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL39LQ96EH5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
RPL39LQ96EH5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.22■□□□□ 0.67
RPL39LQ96EH5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RPL39LQ96EH5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL39LQ96EH5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL39LQ96EH5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RPL39LQ96EH5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL39LQ96EH5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL39LQ96EH5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RPL39LQ96EH5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.19■□□□□ 0.66
RPL39LQ96EH5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
RPL39LQ96EH5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL39LQ96EH5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL39LQ96EH5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL39LQ96EH5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.18■□□□□ 0.66
RPL39LQ96EH5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL39LQ96EH5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL39LQ96EH5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL39LQ96EH5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPL39LQ96EH5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL39LQ96EH5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPL39LQ96EH5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RPL39LQ96EH5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL39LQ96EH5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms