Protein–RNA interactions for Protein: Q92781

RDH5, 11-cis retinol dehydrogenase, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH5Q92781 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RDH5Q92781 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RDH5Q92781 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.32■■□□□ 1.32
RDH5Q92781 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RDH5Q92781 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
RDH5Q92781 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RDH5Q92781 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RDH5Q92781 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.31■■□□□ 1.32
RDH5Q92781 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RDH5Q92781 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RDH5Q92781 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RDH5Q92781 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RDH5Q92781 AL391121.1-201ENST00000607967 1349 ntBASIC23.3■■□□□ 1.32
RDH5Q92781 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RDH5Q92781 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RDH5Q92781 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RDH5Q92781 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.25■■□□□ 1.31
RDH5Q92781 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RDH5Q92781 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RDH5Q92781 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.25■■□□□ 1.31
RDH5Q92781 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RDH5Q92781 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RDH5Q92781 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RDH5Q92781 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RDH5Q92781 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RDH5Q92781 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RDH5Q92781 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RDH5Q92781 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RDH5Q92781 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RDH5Q92781 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RDH5Q92781 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RDH5Q92781 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RDH5Q92781 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.19■■□□□ 1.3
RDH5Q92781 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RDH5Q92781 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RDH5Q92781 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.18■■□□□ 1.3
RDH5Q92781 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RDH5Q92781 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.17■■□□□ 1.3
RDH5Q92781 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RDH5Q92781 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RDH5Q92781 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RDH5Q92781 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RDH5Q92781 AC120057.4-201ENST00000624722 1615 ntBASIC23.15■■□□□ 1.3
RDH5Q92781 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.14■■□□□ 1.29
RDH5Q92781 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RDH5Q92781 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RDH5Q92781 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RDH5Q92781 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.1■■□□□ 1.29
RDH5Q92781 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.1■■□□□ 1.29
RDH5Q92781 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RDH5Q92781 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RDH5Q92781 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RDH5Q92781 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RDH5Q92781 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.09■■□□□ 1.29
RDH5Q92781 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RDH5Q92781 AP006261.1-201ENST00000584783 668 ntBASIC23.08■■□□□ 1.29
RDH5Q92781 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
RDH5Q92781 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.07■■□□□ 1.28
RDH5Q92781 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.07■■□□□ 1.28
RDH5Q92781 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RDH5Q92781 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RDH5Q92781 RPS2P35-201ENST00000443417 897 ntBASIC23.06■■□□□ 1.28
RDH5Q92781 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RDH5Q92781 WASH5P-204ENST00000632292 975 ntBASIC23.05■■□□□ 1.28
RDH5Q92781 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RDH5Q92781 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.04■■□□□ 1.28
RDH5Q92781 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RDH5Q92781 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RDH5Q92781 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.01■■□□□ 1.27
RDH5Q92781 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23■■□□□ 1.27
RDH5Q92781 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23■■□□□ 1.27
RDH5Q92781 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23■■□□□ 1.27
RDH5Q92781 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RDH5Q92781 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RDH5Q92781 AL162393.1-201ENST00000437852 946 ntBASIC22.99■■□□□ 1.27
RDH5Q92781 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.98■■□□□ 1.27
RDH5Q92781 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RDH5Q92781 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.97■■□□□ 1.27
RDH5Q92781 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RDH5Q92781 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RDH5Q92781 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RDH5Q92781 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.96■■□□□ 1.27
RDH5Q92781 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.96■■□□□ 1.27
RDH5Q92781 MIR3665-201ENST00000578708 105 ntBASIC22.96■■□□□ 1.27
RDH5Q92781 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RDH5Q92781 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RDH5Q92781 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RDH5Q92781 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
RDH5Q92781 MIR762-201ENST00000390236 83 ntBASIC22.95■■□□□ 1.26
RDH5Q92781 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.94■■□□□ 1.26
RDH5Q92781 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.94■■□□□ 1.26
RDH5Q92781 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RDH5Q92781 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RDH5Q92781 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RDH5Q92781 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RDH5Q92781 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.93■■□□□ 1.26
RDH5Q92781 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.92■■□□□ 1.26
RDH5Q92781 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RDH5Q92781 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RDH5Q92781 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms