Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.16■■■□□ 2.1
PCDH19Q8TAB3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PCDH19Q8TAB3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDH19Q8TAB3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDH19Q8TAB3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
PCDH19Q8TAB3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.14■■■□□ 2.1
PCDH19Q8TAB3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.11■■■□□ 2.09
PCDH19Q8TAB3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDH19Q8TAB3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.1■■■□□ 2.09
PCDH19Q8TAB3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDH19Q8TAB3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDH19Q8TAB3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDH19Q8TAB3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.05■■■□□ 2.08
PCDH19Q8TAB3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.04■■■□□ 2.08
PCDH19Q8TAB3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PCDH19Q8TAB3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PCDH19Q8TAB3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDH19Q8TAB3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.03■■■□□ 2.08
PCDH19Q8TAB3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDH19Q8TAB3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDH19Q8TAB3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
PCDH19Q8TAB3 AL133380.1-201ENST00000506013 324 ntBASIC28.01■■■□□ 2.07
PCDH19Q8TAB3 RARRES2P7-201ENST00000567349 469 ntBASIC27.98■■■□□ 2.07
PCDH19Q8TAB3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.98■■■□□ 2.07
PCDH19Q8TAB3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDH19Q8TAB3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.96■■■□□ 2.07
PCDH19Q8TAB3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDH19Q8TAB3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
PCDH19Q8TAB3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
PCDH19Q8TAB3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.94■■■□□ 2.06
PCDH19Q8TAB3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.93■■■□□ 2.06
PCDH19Q8TAB3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.93■■■□□ 2.06
PCDH19Q8TAB3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
PCDH19Q8TAB3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
PCDH19Q8TAB3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PCDH19Q8TAB3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PCDH19Q8TAB3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PCDH19Q8TAB3 AL161658.1-201ENST00000623641 1967 ntBASIC27.9■■■□□ 2.06
PCDH19Q8TAB3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.88■■■□□ 2.05
PCDH19Q8TAB3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
PCDH19Q8TAB3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.88■■■□□ 2.05
PCDH19Q8TAB3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
PCDH19Q8TAB3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PCDH19Q8TAB3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.87■■■□□ 2.05
PCDH19Q8TAB3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
PCDH19Q8TAB3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.87■■■□□ 2.05
PCDH19Q8TAB3 WASH5P-204ENST00000632292 975 ntBASIC27.87■■■□□ 2.05
PCDH19Q8TAB3 SETD8P1-201ENST00000623146 1180 ntBASIC27.86■■■□□ 2.05
PCDH19Q8TAB3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCDH19Q8TAB3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDH19Q8TAB3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCDH19Q8TAB3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PCDH19Q8TAB3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.83■■■□□ 2.05
PCDH19Q8TAB3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDH19Q8TAB3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDH19Q8TAB3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDH19Q8TAB3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCDH19Q8TAB3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDH19Q8TAB3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDH19Q8TAB3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.8■■■□□ 2.04
PCDH19Q8TAB3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
PCDH19Q8TAB3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
PCDH19Q8TAB3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PCDH19Q8TAB3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDH19Q8TAB3 ABCB10P1-201ENST00000614297 2181 ntBASIC27.76■■■□□ 2.03
PCDH19Q8TAB3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.76■■■□□ 2.03
PCDH19Q8TAB3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PCDH19Q8TAB3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PCDH19Q8TAB3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PCDH19Q8TAB3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.75■■■□□ 2.03
PCDH19Q8TAB3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDH19Q8TAB3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCDH19Q8TAB3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.73■■■□□ 2.03
PCDH19Q8TAB3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PCDH19Q8TAB3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.72■■■□□ 2.03
PCDH19Q8TAB3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDH19Q8TAB3 AC097358.2-201ENST00000607541 1159 ntBASIC27.71■■■□□ 2.03
PCDH19Q8TAB3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.03
PCDH19Q8TAB3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDH19Q8TAB3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
PCDH19Q8TAB3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
PCDH19Q8TAB3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.69■■■□□ 2.02
PCDH19Q8TAB3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.68■■■□□ 2.02
PCDH19Q8TAB3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PCDH19Q8TAB3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PCDH19Q8TAB3 AC136428.2-201ENST00000563187 214 ntBASIC27.66■■■□□ 2.02
PCDH19Q8TAB3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
PCDH19Q8TAB3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PCDH19Q8TAB3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PCDH19Q8TAB3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDH19Q8TAB3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PCDH19Q8TAB3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
PCDH19Q8TAB3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PCDH19Q8TAB3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
PCDH19Q8TAB3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PCDH19Q8TAB3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PCDH19Q8TAB3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.63■■■□□ 2.01
PCDH19Q8TAB3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PCDH19Q8TAB3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PCDH19Q8TAB3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms