Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.98■■■□□ 2.07
SYNPOQ8N3V7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SYNPOQ8N3V7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.97■■■□□ 2.07
SYNPOQ8N3V7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.95■■■□□ 2.06
SYNPOQ8N3V7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.95■■■□□ 2.06
SYNPOQ8N3V7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.95■■■□□ 2.06
SYNPOQ8N3V7 HLA-V-202ENST00000446817 847 ntBASIC27.94■■■□□ 2.06
SYNPOQ8N3V7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.94■■■□□ 2.06
SYNPOQ8N3V7 WASH5P-204ENST00000632292 975 ntBASIC27.94■■■□□ 2.06
SYNPOQ8N3V7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.93■■■□□ 2.06
SYNPOQ8N3V7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SYNPOQ8N3V7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SYNPOQ8N3V7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.92■■■□□ 2.06
SYNPOQ8N3V7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
SYNPOQ8N3V7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SYNPOQ8N3V7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
SYNPOQ8N3V7 ZNRF2P2-203ENST00000454624 420 ntBASIC27.89■■■□□ 2.06
SYNPOQ8N3V7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
SYNPOQ8N3V7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
SYNPOQ8N3V7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SYNPOQ8N3V7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.88■■■□□ 2.05
SYNPOQ8N3V7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
SYNPOQ8N3V7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SYNPOQ8N3V7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SYNPOQ8N3V7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.82■■■□□ 2.04
SYNPOQ8N3V7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.81■■■□□ 2.04
SYNPOQ8N3V7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SYNPOQ8N3V7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SYNPOQ8N3V7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.78■■■□□ 2.04
SYNPOQ8N3V7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SYNPOQ8N3V7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SYNPOQ8N3V7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.77■■■□□ 2.04
SYNPOQ8N3V7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
SYNPOQ8N3V7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SYNPOQ8N3V7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.76■■■□□ 2.03
SYNPOQ8N3V7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SYNPOQ8N3V7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SYNPOQ8N3V7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SYNPOQ8N3V7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SYNPOQ8N3V7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SYNPOQ8N3V7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SYNPOQ8N3V7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.72■■■□□ 2.03
SYNPOQ8N3V7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SYNPOQ8N3V7 DUX4L29-201ENST00000425409 679 ntBASIC27.71■■■□□ 2.03
SYNPOQ8N3V7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.7■■■□□ 2.02
SYNPOQ8N3V7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SYNPOQ8N3V7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.69■■■□□ 2.02
SYNPOQ8N3V7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SYNPOQ8N3V7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SYNPOQ8N3V7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
SYNPOQ8N3V7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SYNPOQ8N3V7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.67■■■□□ 2.02
SYNPOQ8N3V7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SYNPOQ8N3V7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
SYNPOQ8N3V7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SYNPOQ8N3V7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SYNPOQ8N3V7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.63■■■□□ 2.01
SYNPOQ8N3V7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SYNPOQ8N3V7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SYNPOQ8N3V7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SYNPOQ8N3V7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
SYNPOQ8N3V7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SYNPOQ8N3V7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SYNPOQ8N3V7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SYNPOQ8N3V7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SYNPOQ8N3V7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
SYNPOQ8N3V7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SYNPOQ8N3V7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.57■■■□□ 2
SYNPOQ8N3V7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SYNPOQ8N3V7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
SYNPOQ8N3V7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SYNPOQ8N3V7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.55■■■□□ 2
SYNPOQ8N3V7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.54■■■□□ 2
SYNPOQ8N3V7 AC021231.2-201ENST00000594613 730 ntBASIC27.54■■■□□ 2
SYNPOQ8N3V7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SYNPOQ8N3V7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.53■■■□□ 2
SYNPOQ8N3V7 MIR4449-201ENST00000578365 66 ntBASIC27.53■■■□□ 2
SYNPOQ8N3V7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
SYNPOQ8N3V7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
SYNPOQ8N3V7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SYNPOQ8N3V7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.52■■■□□ 2
SYNPOQ8N3V7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SYNPOQ8N3V7 AC108673.1-201ENST00000510422 1159 ntBASIC27.51■■□□□ 1.99
SYNPOQ8N3V7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SYNPOQ8N3V7 MIR639-201ENST00000384974 98 ntBASIC27.5■■□□□ 1.99
SYNPOQ8N3V7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SYNPOQ8N3V7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SYNPOQ8N3V7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.49■■□□□ 1.99
SYNPOQ8N3V7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.48■■□□□ 1.99
SYNPOQ8N3V7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.48■■□□□ 1.99
SYNPOQ8N3V7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.46■■□□□ 1.99
SYNPOQ8N3V7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SYNPOQ8N3V7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.45■■□□□ 1.99
SYNPOQ8N3V7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.45■■□□□ 1.98
SYNPOQ8N3V7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
SYNPOQ8N3V7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.42■■□□□ 1.98
SYNPOQ8N3V7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SYNPOQ8N3V7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.42■■□□□ 1.98
SYNPOQ8N3V7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SYNPOQ8N3V7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms