Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SYVN1Q86TM6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.73■■□□□ 1.87
SYVN1Q86TM6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.71■■□□□ 1.87
SYVN1Q86TM6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.71■■□□□ 1.87
SYVN1Q86TM6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SYVN1Q86TM6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SYVN1Q86TM6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.69■■□□□ 1.86
SYVN1Q86TM6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.68■■□□□ 1.86
SYVN1Q86TM6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.68■■□□□ 1.86
SYVN1Q86TM6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.66■■□□□ 1.86
SYVN1Q86TM6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYVN1Q86TM6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYVN1Q86TM6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SYVN1Q86TM6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SYVN1Q86TM6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SYVN1Q86TM6 AC136428.2-201ENST00000563187 214 ntBASIC26.65■■□□□ 1.86
SYVN1Q86TM6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SYVN1Q86TM6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SYVN1Q86TM6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.6■■□□□ 1.85
SYVN1Q86TM6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SYVN1Q86TM6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SYVN1Q86TM6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SYVN1Q86TM6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.56■■□□□ 1.84
SYVN1Q86TM6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SYVN1Q86TM6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SYVN1Q86TM6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.53■■□□□ 1.84
SYVN1Q86TM6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SYVN1Q86TM6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.51■■□□□ 1.83
SYVN1Q86TM6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SYVN1Q86TM6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SYVN1Q86TM6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SYVN1Q86TM6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SYVN1Q86TM6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SYVN1Q86TM6 SUZ12P1-203ENST00000578195 985 ntBASIC26.5■■□□□ 1.83
SYVN1Q86TM6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.5■■□□□ 1.83
SYVN1Q86TM6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SYVN1Q86TM6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SYVN1Q86TM6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SYVN1Q86TM6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.48■■□□□ 1.83
SYVN1Q86TM6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.48■■□□□ 1.83
SYVN1Q86TM6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SYVN1Q86TM6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SYVN1Q86TM6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SYVN1Q86TM6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SYVN1Q86TM6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SYVN1Q86TM6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.45■■□□□ 1.83
SYVN1Q86TM6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
SYVN1Q86TM6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SYVN1Q86TM6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SYVN1Q86TM6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.42■■□□□ 1.82
SYVN1Q86TM6 ABCB10P1-201ENST00000614297 2181 ntBASIC26.41■■□□□ 1.82
SYVN1Q86TM6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
SYVN1Q86TM6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SYVN1Q86TM6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SYVN1Q86TM6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SYVN1Q86TM6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
SYVN1Q86TM6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SYVN1Q86TM6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.38■■□□□ 1.81
SYVN1Q86TM6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SYVN1Q86TM6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SYVN1Q86TM6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SYVN1Q86TM6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SYVN1Q86TM6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.35■■□□□ 1.81
SYVN1Q86TM6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SYVN1Q86TM6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SYVN1Q86TM6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SYVN1Q86TM6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
SYVN1Q86TM6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SYVN1Q86TM6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SYVN1Q86TM6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.32■■□□□ 1.8
SYVN1Q86TM6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SYVN1Q86TM6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SYVN1Q86TM6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SYVN1Q86TM6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SYVN1Q86TM6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SYVN1Q86TM6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.27■■□□□ 1.8
SYVN1Q86TM6 CAHM-201ENST00000604200 896 ntBASIC26.27■■□□□ 1.8
SYVN1Q86TM6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SYVN1Q86TM6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SYVN1Q86TM6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SYVN1Q86TM6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
SYVN1Q86TM6 RPS2P35-201ENST00000443417 897 ntBASIC26.25■■□□□ 1.79
SYVN1Q86TM6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
SYVN1Q86TM6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SYVN1Q86TM6 AL133380.1-201ENST00000506013 324 ntBASIC26.24■■□□□ 1.79
SYVN1Q86TM6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SYVN1Q86TM6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SYVN1Q86TM6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SYVN1Q86TM6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SYVN1Q86TM6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SYVN1Q86TM6 AL161658.1-201ENST00000623641 1967 ntBASIC26.2■■□□□ 1.79
SYVN1Q86TM6 AL391121.1-201ENST00000607967 1349 ntBASIC26.2■■□□□ 1.79
SYVN1Q86TM6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.2■■□□□ 1.78
SYVN1Q86TM6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SYVN1Q86TM6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SYVN1Q86TM6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SYVN1Q86TM6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SYVN1Q86TM6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SYVN1Q86TM6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SYVN1Q86TM6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms