Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FAM27BQ5VT28 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FAM27BQ5VT28 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FAM27BQ5VT28 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FAM27BQ5VT28 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FAM27BQ5VT28 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FAM27BQ5VT28 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.82■■□□□ 1.4
FAM27BQ5VT28 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FAM27BQ5VT28 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FAM27BQ5VT28 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
FAM27BQ5VT28 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FAM27BQ5VT28 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FAM27BQ5VT28 SETD8P1-201ENST00000623146 1180 ntBASIC23.78■■□□□ 1.4
FAM27BQ5VT28 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FAM27BQ5VT28 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
FAM27BQ5VT28 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.77■■□□□ 1.4
FAM27BQ5VT28 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FAM27BQ5VT28 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.77■■□□□ 1.4
FAM27BQ5VT28 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FAM27BQ5VT28 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FAM27BQ5VT28 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FAM27BQ5VT28 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FAM27BQ5VT28 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FAM27BQ5VT28 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
FAM27BQ5VT28 WASH5P-204ENST00000632292 975 ntBASIC23.74■■□□□ 1.39
FAM27BQ5VT28 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
FAM27BQ5VT28 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
FAM27BQ5VT28 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
FAM27BQ5VT28 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
FAM27BQ5VT28 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
FAM27BQ5VT28 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
FAM27BQ5VT28 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
FAM27BQ5VT28 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
FAM27BQ5VT28 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
FAM27BQ5VT28 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
FAM27BQ5VT28 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
FAM27BQ5VT28 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
FAM27BQ5VT28 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
FAM27BQ5VT28 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
FAM27BQ5VT28 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.67■■□□□ 1.38
FAM27BQ5VT28 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
FAM27BQ5VT28 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.64■■□□□ 1.37
FAM27BQ5VT28 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FAM27BQ5VT28 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
FAM27BQ5VT28 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.63■■□□□ 1.37
FAM27BQ5VT28 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.63■■□□□ 1.37
FAM27BQ5VT28 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
FAM27BQ5VT28 AL161658.1-201ENST00000623641 1967 ntBASIC23.62■■□□□ 1.37
FAM27BQ5VT28 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
FAM27BQ5VT28 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FAM27BQ5VT28 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FAM27BQ5VT28 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.6■■□□□ 1.37
FAM27BQ5VT28 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
FAM27BQ5VT28 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FAM27BQ5VT28 AC097358.2-201ENST00000607541 1159 ntBASIC23.59■■□□□ 1.37
FAM27BQ5VT28 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
FAM27BQ5VT28 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
FAM27BQ5VT28 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
FAM27BQ5VT28 AC136428.2-201ENST00000563187 214 ntBASIC23.57■■□□□ 1.36
FAM27BQ5VT28 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FAM27BQ5VT28 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
FAM27BQ5VT28 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FAM27BQ5VT28 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FAM27BQ5VT28 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FAM27BQ5VT28 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FAM27BQ5VT28 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
FAM27BQ5VT28 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.53■■□□□ 1.36
FAM27BQ5VT28 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
FAM27BQ5VT28 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FAM27BQ5VT28 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FAM27BQ5VT28 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FAM27BQ5VT28 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.52■■□□□ 1.36
FAM27BQ5VT28 AL391121.1-201ENST00000607967 1349 ntBASIC23.52■■□□□ 1.36
FAM27BQ5VT28 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.52■■□□□ 1.36
FAM27BQ5VT28 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FAM27BQ5VT28 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FAM27BQ5VT28 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FAM27BQ5VT28 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.51■■□□□ 1.35
FAM27BQ5VT28 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.51■■□□□ 1.35
FAM27BQ5VT28 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
FAM27BQ5VT28 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
FAM27BQ5VT28 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.5■■□□□ 1.35
FAM27BQ5VT28 CAHM-201ENST00000604200 896 ntBASIC23.5■■□□□ 1.35
FAM27BQ5VT28 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
FAM27BQ5VT28 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FAM27BQ5VT28 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
FAM27BQ5VT28 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
FAM27BQ5VT28 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
FAM27BQ5VT28 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FAM27BQ5VT28 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
FAM27BQ5VT28 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
FAM27BQ5VT28 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.47■■□□□ 1.35
FAM27BQ5VT28 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
FAM27BQ5VT28 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FAM27BQ5VT28 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
FAM27BQ5VT28 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.45■■□□□ 1.34
FAM27BQ5VT28 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.45■■□□□ 1.34
FAM27BQ5VT28 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
FAM27BQ5VT28 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
FAM27BQ5VT28 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms