Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
HDGFP51858 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC39.61■■■■□ 3.93
HDGFP51858 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
HDGFP51858 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
HDGFP51858 HGH1-207ENST00000628266 258 ntTSL 5 BASIC39.58■■■■□ 3.93
HDGFP51858 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC39.57■■■■□ 3.93
HDGFP51858 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
HDGFP51858 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
HDGFP51858 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.54■■■■□ 3.92
HDGFP51858 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
HDGFP51858 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
HDGFP51858 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.52■■■■□ 3.92
HDGFP51858 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC39.51■■■■□ 3.92
HDGFP51858 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
HDGFP51858 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
HDGFP51858 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.5■■■■□ 3.91
HDGFP51858 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
HDGFP51858 RPS2-209ENST00000529806 993 ntTSL 3 BASIC39.49■■■■□ 3.91
HDGFP51858 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
HDGFP51858 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.48■■■■□ 3.91
HDGFP51858 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
HDGFP51858 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
HDGFP51858 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC39.46■■■■□ 3.91
HDGFP51858 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC39.46■■■■□ 3.91
HDGFP51858 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC39.46■■■■□ 3.91
HDGFP51858 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.44■■■■□ 3.9
HDGFP51858 DUX4L29-201ENST00000425409 679 ntBASIC39.43■■■■□ 3.9
HDGFP51858 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC39.43■■■■□ 3.9
HDGFP51858 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39.37■■■■□ 3.89
HDGFP51858 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
HDGFP51858 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
HDGFP51858 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC39.36■■■■□ 3.89
HDGFP51858 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.35■■■■□ 3.89
HDGFP51858 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
HDGFP51858 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
HDGFP51858 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC39.32■■■■□ 3.89
HDGFP51858 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
HDGFP51858 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC39.3■■■■□ 3.88
HDGFP51858 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC39.28■■■■□ 3.88
HDGFP51858 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
HDGFP51858 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.27■■■■□ 3.88
HDGFP51858 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
HDGFP51858 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
HDGFP51858 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
HDGFP51858 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC39.26■■■■□ 3.87
HDGFP51858 MIR4449-201ENST00000578365 66 ntBASIC39.25■■■■□ 3.87
HDGFP51858 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
HDGFP51858 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
HDGFP51858 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC39.22■■■■□ 3.87
HDGFP51858 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
HDGFP51858 RPS2-202ENST00000526522 924 ntTSL 2 BASIC39.21■■■■□ 3.87
HDGFP51858 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
HDGFP51858 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
HDGFP51858 MIR639-201ENST00000384974 98 ntBASIC39.2■■■■□ 3.87
HDGFP51858 MACF1-219ENST00000484793 834 ntTSL 2 BASIC39.2■■■■□ 3.87
HDGFP51858 AC021231.2-201ENST00000594613 730 ntBASIC39.19■■■■□ 3.86
HDGFP51858 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
HDGFP51858 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC39.15■■■■□ 3.86
HDGFP51858 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
HDGFP51858 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC39.14■■■■□ 3.86
HDGFP51858 CIB2-204ENST00000557846 934 ntTSL 3 BASIC39.14■■■■□ 3.86
HDGFP51858 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
HDGFP51858 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC39.1■■■■□ 3.85
HDGFP51858 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
HDGFP51858 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.08■■■■□ 3.85
HDGFP51858 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC39.08■■■■□ 3.85
HDGFP51858 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC39.08■■■■□ 3.85
HDGFP51858 AC108673.1-201ENST00000510422 1159 ntBASIC39.06■■■■□ 3.84
HDGFP51858 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
HDGFP51858 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC39.01■■■■□ 3.84
HDGFP51858 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC39.01■■■■□ 3.84
HDGFP51858 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
HDGFP51858 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC39■■■■□ 3.83
HDGFP51858 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC39■■■■□ 3.83
HDGFP51858 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC38.99■■■■□ 3.83
HDGFP51858 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
HDGFP51858 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC38.98■■■■□ 3.83
HDGFP51858 MIR3648-2-201ENST00000581792 180 ntBASIC38.98■■■■□ 3.83
HDGFP51858 MIR3648-1-201ENST00000615959 180 ntBASIC38.98■■■■□ 3.83
HDGFP51858 RNF166-209ENST00000567844 633 ntTSL 5 BASIC38.97■■■■□ 3.83
HDGFP51858 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
HDGFP51858 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
HDGFP51858 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
HDGFP51858 CALM3-209ENST00000597743 577 ntTSL 4 BASIC38.95■■■■□ 3.83
HDGFP51858 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
HDGFP51858 GDI1-215ENST00000630693 786 ntTSL 4 BASIC38.94■■■■□ 3.82
HDGFP51858 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
HDGFP51858 AGPS-202ENST00000409888 815 ntTSL 4 BASIC38.91■■■■□ 3.82
HDGFP51858 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC38.91■■■■□ 3.82
HDGFP51858 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC38.91■■■■□ 3.82
HDGFP51858 AC016575.1-201ENST00000607026 382 ntBASIC38.91■■■■□ 3.82
HDGFP51858 MIR6090-201ENST00000622481 60 ntBASIC38.91■■■■□ 3.82
HDGFP51858 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC38.91■■■■□ 3.82
HDGFP51858 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
HDGFP51858 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
HDGFP51858 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
HDGFP51858 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC38.88■■■■□ 3.81
HDGFP51858 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
HDGFP51858 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
HDGFP51858 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms