Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6GP18545 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
PDE6GP18545 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6GP18545 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PDE6GP18545 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PDE6GP18545 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6GP18545 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC16.96■□□□□ 0.3
PDE6GP18545 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6GP18545 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6GP18545 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6GP18545 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC16.93■□□□□ 0.3
PDE6GP18545 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6GP18545 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6GP18545 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6GP18545 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6GP18545 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC16.91■□□□□ 0.3
PDE6GP18545 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6GP18545 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6GP18545 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6GP18545 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6GP18545 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6GP18545 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDE6GP18545 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6GP18545 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC16.89■□□□□ 0.29
PDE6GP18545 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6GP18545 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6GP18545 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6GP18545 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6GP18545 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDE6GP18545 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PDE6GP18545 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6GP18545 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6GP18545 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6GP18545 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDE6GP18545 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6GP18545 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6GP18545 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC16.82■□□□□ 0.28
PDE6GP18545 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6GP18545 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PDE6GP18545 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PDE6GP18545 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6GP18545 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PDE6GP18545 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PDE6GP18545 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6GP18545 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6GP18545 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDE6GP18545 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6GP18545 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC16.79■□□□□ 0.28
PDE6GP18545 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6GP18545 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6GP18545 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PDE6GP18545 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6GP18545 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6GP18545 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6GP18545 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6GP18545 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6GP18545 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6GP18545 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6GP18545 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6GP18545 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6GP18545 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6GP18545 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PDE6GP18545 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6GP18545 CREM-210ENST00000374721 2020 ntTSL 5 BASIC16.75■□□□□ 0.27
PDE6GP18545 AC120057.4-201ENST00000624722 1615 ntBASIC16.74■□□□□ 0.27
PDE6GP18545 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6GP18545 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6GP18545 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6GP18545 AC142086.6-201ENST00000621154 1765 ntBASIC16.74■□□□□ 0.27
PDE6GP18545 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6GP18545 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6GP18545 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.73■□□□□ 0.27
PDE6GP18545 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC16.72■□□□□ 0.27
PDE6GP18545 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC16.71■□□□□ 0.27
PDE6GP18545 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6GP18545 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6GP18545 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6GP18545 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PDE6GP18545 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PDE6GP18545 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6GP18545 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6GP18545 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6GP18545 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6GP18545 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6GP18545 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6GP18545 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6GP18545 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PDE6GP18545 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6GP18545 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6GP18545 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6GP18545 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6GP18545 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6GP18545 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6GP18545 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6GP18545 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6GP18545 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6GP18545 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6GP18545 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6GP18545 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.64■□□□□ 0.25
PDE6GP18545 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms