Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SLC33A1O00400 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SLC33A1O00400 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SLC33A1O00400 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SLC33A1O00400 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SLC33A1O00400 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SLC33A1O00400 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SLC33A1O00400 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SLC33A1O00400 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SLC33A1O00400 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC33A1O00400 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC33A1O00400 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC33A1O00400 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.91■■□□□ 1.26
SLC33A1O00400 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC33A1O00400 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
SLC33A1O00400 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.89■■□□□ 1.25
SLC33A1O00400 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SLC33A1O00400 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SLC33A1O00400 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.88■■□□□ 1.25
SLC33A1O00400 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.88■■□□□ 1.25
SLC33A1O00400 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.88■■□□□ 1.25
SLC33A1O00400 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SLC33A1O00400 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
SLC33A1O00400 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.87■■□□□ 1.25
SLC33A1O00400 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SLC33A1O00400 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
SLC33A1O00400 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC33A1O00400 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC33A1O00400 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC33A1O00400 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC33A1O00400 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC33A1O00400 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
SLC33A1O00400 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC33A1O00400 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SLC33A1O00400 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.81■■□□□ 1.24
SLC33A1O00400 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC33A1O00400 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.79■■□□□ 1.24
SLC33A1O00400 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
SLC33A1O00400 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC33A1O00400 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SLC33A1O00400 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.75■■□□□ 1.23
SLC33A1O00400 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SLC33A1O00400 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
SLC33A1O00400 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC33A1O00400 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SLC33A1O00400 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC33A1O00400 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.72■■□□□ 1.23
SLC33A1O00400 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
SLC33A1O00400 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.7■■□□□ 1.22
SLC33A1O00400 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC33A1O00400 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
SLC33A1O00400 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SLC33A1O00400 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC33A1O00400 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.68■■□□□ 1.22
SLC33A1O00400 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.68■■□□□ 1.22
SLC33A1O00400 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC33A1O00400 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.67■■□□□ 1.22
SLC33A1O00400 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
SLC33A1O00400 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC33A1O00400 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SLC33A1O00400 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC33A1O00400 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
SLC33A1O00400 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC33A1O00400 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.61■■□□□ 1.21
SLC33A1O00400 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC33A1O00400 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC33A1O00400 AL161658.1-201ENST00000623641 1967 ntBASIC22.6■■□□□ 1.21
SLC33A1O00400 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC33A1O00400 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC33A1O00400 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC33A1O00400 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC33A1O00400 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC33A1O00400 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.58■■□□□ 1.21
SLC33A1O00400 ABCB10P1-201ENST00000614297 2181 ntBASIC22.58■■□□□ 1.21
SLC33A1O00400 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC33A1O00400 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC33A1O00400 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SLC33A1O00400 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
SLC33A1O00400 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
SLC33A1O00400 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.56■■□□□ 1.2
SLC33A1O00400 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC33A1O00400 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC33A1O00400 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC33A1O00400 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC33A1O00400 AL133380.1-201ENST00000506013 324 ntBASIC22.55■■□□□ 1.2
SLC33A1O00400 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.55■■□□□ 1.2
SLC33A1O00400 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SLC33A1O00400 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC33A1O00400 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SLC33A1O00400 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SLC33A1O00400 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC33A1O00400 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC33A1O00400 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC33A1O00400 WASH5P-204ENST00000632292 975 ntBASIC22.51■■□□□ 1.19
SLC33A1O00400 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SLC33A1O00400 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC33A1O00400 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SLC33A1O00400 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC33A1O00400 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC33A1O00400 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms