Protein–RNA interactions for Protein: D6RBQ6

USP17L17, Ubiquitin carboxyl-terminal hydrolase 17-like protein 17, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L17D6RBQ6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
USP17L17D6RBQ6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
USP17L17D6RBQ6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.89■■■□□ 2.7
USP17L17D6RBQ6 ABHD17AP4-201ENST00000411545 909 ntBASIC31.89■■■□□ 2.7
USP17L17D6RBQ6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
USP17L17D6RBQ6 AC044849.2-201ENST00000606596 710 ntBASIC31.89■■■□□ 2.7
USP17L17D6RBQ6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP17L17D6RBQ6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
USP17L17D6RBQ6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP17L17D6RBQ6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
USP17L17D6RBQ6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
USP17L17D6RBQ6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
USP17L17D6RBQ6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
USP17L17D6RBQ6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
USP17L17D6RBQ6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.83■■■□□ 2.69
USP17L17D6RBQ6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.83■■■□□ 2.69
USP17L17D6RBQ6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
USP17L17D6RBQ6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
USP17L17D6RBQ6 MIR7108-201ENST00000614319 87 ntBASIC31.78■■■□□ 2.68
USP17L17D6RBQ6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
USP17L17D6RBQ6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
USP17L17D6RBQ6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
USP17L17D6RBQ6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.75■■■□□ 2.67
USP17L17D6RBQ6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
USP17L17D6RBQ6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
USP17L17D6RBQ6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
USP17L17D6RBQ6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
USP17L17D6RBQ6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
USP17L17D6RBQ6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.71■■■□□ 2.67
USP17L17D6RBQ6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.69■■■□□ 2.66
USP17L17D6RBQ6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
USP17L17D6RBQ6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.67■■■□□ 2.66
USP17L17D6RBQ6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
USP17L17D6RBQ6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
USP17L17D6RBQ6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.66■■■□□ 2.66
USP17L17D6RBQ6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
USP17L17D6RBQ6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
USP17L17D6RBQ6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
USP17L17D6RBQ6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
USP17L17D6RBQ6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
USP17L17D6RBQ6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.65■■■□□ 2.66
USP17L17D6RBQ6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
USP17L17D6RBQ6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
USP17L17D6RBQ6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
USP17L17D6RBQ6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.62■■■□□ 2.65
USP17L17D6RBQ6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.61■■■□□ 2.65
USP17L17D6RBQ6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP17L17D6RBQ6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
USP17L17D6RBQ6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
USP17L17D6RBQ6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
USP17L17D6RBQ6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.59■■■□□ 2.65
USP17L17D6RBQ6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.58■■■□□ 2.65
USP17L17D6RBQ6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.58■■■□□ 2.65
USP17L17D6RBQ6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
USP17L17D6RBQ6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
USP17L17D6RBQ6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
USP17L17D6RBQ6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
USP17L17D6RBQ6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
USP17L17D6RBQ6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.56■■■□□ 2.64
USP17L17D6RBQ6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.55■■■□□ 2.64
USP17L17D6RBQ6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.55■■■□□ 2.64
USP17L17D6RBQ6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
USP17L17D6RBQ6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
USP17L17D6RBQ6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
USP17L17D6RBQ6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP17L17D6RBQ6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP17L17D6RBQ6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
USP17L17D6RBQ6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
USP17L17D6RBQ6 ZNRF2P2-203ENST00000454624 420 ntBASIC31.51■■■□□ 2.63
USP17L17D6RBQ6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.5■■■□□ 2.63
USP17L17D6RBQ6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP17L17D6RBQ6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.49■■■□□ 2.63
USP17L17D6RBQ6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
USP17L17D6RBQ6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.49■■■□□ 2.63
USP17L17D6RBQ6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP17L17D6RBQ6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L17D6RBQ6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L17D6RBQ6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L17D6RBQ6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L17D6RBQ6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
USP17L17D6RBQ6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
USP17L17D6RBQ6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.47■■■□□ 2.63
USP17L17D6RBQ6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.46■■■□□ 2.63
USP17L17D6RBQ6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
USP17L17D6RBQ6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.44■■■□□ 2.62
USP17L17D6RBQ6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.44■■■□□ 2.62
USP17L17D6RBQ6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP17L17D6RBQ6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.43■■■□□ 2.62
USP17L17D6RBQ6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP17L17D6RBQ6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
USP17L17D6RBQ6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
USP17L17D6RBQ6 HLA-V-202ENST00000446817 847 ntBASIC31.42■■■□□ 2.62
USP17L17D6RBQ6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.42■■■□□ 2.62
USP17L17D6RBQ6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP17L17D6RBQ6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.41■■■□□ 2.62
USP17L17D6RBQ6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
USP17L17D6RBQ6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.39■■■□□ 2.62
USP17L17D6RBQ6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.39■■■□□ 2.62
USP17L17D6RBQ6 DUX4L29-201ENST00000425409 679 ntBASIC31.37■■■□□ 2.61
USP17L17D6RBQ6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms