Protein–RNA interactions for Protein: A0A140TA62

LOC100653049, Uncharacterized protein, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100653049A0A140TA62 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LOC100653049A0A140TA62 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
LOC100653049A0A140TA62 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LOC100653049A0A140TA62 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.28■■□□□ 1.8
LOC100653049A0A140TA62 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
LOC100653049A0A140TA62 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.27■■□□□ 1.8
LOC100653049A0A140TA62 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LOC100653049A0A140TA62 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LOC100653049A0A140TA62 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
LOC100653049A0A140TA62 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
LOC100653049A0A140TA62 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LOC100653049A0A140TA62 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.24■■□□□ 1.79
LOC100653049A0A140TA62 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LOC100653049A0A140TA62 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.22■■□□□ 1.79
LOC100653049A0A140TA62 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.22■■□□□ 1.79
LOC100653049A0A140TA62 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
LOC100653049A0A140TA62 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LOC100653049A0A140TA62 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
LOC100653049A0A140TA62 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
LOC100653049A0A140TA62 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LOC100653049A0A140TA62 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.2■■□□□ 1.78
LOC100653049A0A140TA62 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LOC100653049A0A140TA62 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
LOC100653049A0A140TA62 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LOC100653049A0A140TA62 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
LOC100653049A0A140TA62 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
LOC100653049A0A140TA62 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LOC100653049A0A140TA62 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
LOC100653049A0A140TA62 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LOC100653049A0A140TA62 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LOC100653049A0A140TA62 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
LOC100653049A0A140TA62 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LOC100653049A0A140TA62 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LOC100653049A0A140TA62 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LOC100653049A0A140TA62 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
LOC100653049A0A140TA62 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
LOC100653049A0A140TA62 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LOC100653049A0A140TA62 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LOC100653049A0A140TA62 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.07■■□□□ 1.76
LOC100653049A0A140TA62 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.07■■□□□ 1.76
LOC100653049A0A140TA62 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LOC100653049A0A140TA62 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
LOC100653049A0A140TA62 ST7-AS1-201ENST00000456775 1889 ntBASIC26.05■■□□□ 1.76
LOC100653049A0A140TA62 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LOC100653049A0A140TA62 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC100653049A0A140TA62 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.02■■□□□ 1.76
LOC100653049A0A140TA62 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.02■■□□□ 1.76
LOC100653049A0A140TA62 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC100653049A0A140TA62 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LOC100653049A0A140TA62 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.01■■□□□ 1.75
LOC100653049A0A140TA62 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.01■■□□□ 1.75
LOC100653049A0A140TA62 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LOC100653049A0A140TA62 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LOC100653049A0A140TA62 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26■■□□□ 1.75
LOC100653049A0A140TA62 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
LOC100653049A0A140TA62 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
LOC100653049A0A140TA62 AL161658.1-201ENST00000623641 1967 ntBASIC25.98■■□□□ 1.75
LOC100653049A0A140TA62 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
LOC100653049A0A140TA62 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
LOC100653049A0A140TA62 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
LOC100653049A0A140TA62 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
LOC100653049A0A140TA62 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
LOC100653049A0A140TA62 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
LOC100653049A0A140TA62 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
LOC100653049A0A140TA62 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
LOC100653049A0A140TA62 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
LOC100653049A0A140TA62 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
LOC100653049A0A140TA62 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LOC100653049A0A140TA62 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LOC100653049A0A140TA62 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
LOC100653049A0A140TA62 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.94■■□□□ 1.74
LOC100653049A0A140TA62 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.93■■□□□ 1.74
LOC100653049A0A140TA62 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
LOC100653049A0A140TA62 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LOC100653049A0A140TA62 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
LOC100653049A0A140TA62 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LOC100653049A0A140TA62 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
LOC100653049A0A140TA62 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LOC100653049A0A140TA62 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LOC100653049A0A140TA62 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
LOC100653049A0A140TA62 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
LOC100653049A0A140TA62 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.88■■□□□ 1.73
LOC100653049A0A140TA62 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
LOC100653049A0A140TA62 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.87■■□□□ 1.73
LOC100653049A0A140TA62 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LOC100653049A0A140TA62 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LOC100653049A0A140TA62 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.86■■□□□ 1.73
LOC100653049A0A140TA62 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LOC100653049A0A140TA62 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LOC100653049A0A140TA62 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LOC100653049A0A140TA62 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LOC100653049A0A140TA62 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LOC100653049A0A140TA62 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
LOC100653049A0A140TA62 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LOC100653049A0A140TA62 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LOC100653049A0A140TA62 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LOC100653049A0A140TA62 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LOC100653049A0A140TA62 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LOC100653049A0A140TA62 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
LOC100653049A0A140TA62 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms