Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
IGHV4-28A0A0C4DH34 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.62■□□□□ 0.73
IGHV4-28A0A0C4DH34 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IGHV4-28A0A0C4DH34 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.61■□□□□ 0.73
IGHV4-28A0A0C4DH34 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IGHV4-28A0A0C4DH34 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IGHV4-28A0A0C4DH34 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGHV4-28A0A0C4DH34 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV4-28A0A0C4DH34 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV4-28A0A0C4DH34 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.56■□□□□ 0.72
IGHV4-28A0A0C4DH34 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV4-28A0A0C4DH34 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV4-28A0A0C4DH34 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV4-28A0A0C4DH34 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.55■□□□□ 0.72
IGHV4-28A0A0C4DH34 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV4-28A0A0C4DH34 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IGHV4-28A0A0C4DH34 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IGHV4-28A0A0C4DH34 AC120057.4-201ENST00000624722 1615 ntBASIC19.52■□□□□ 0.72
IGHV4-28A0A0C4DH34 AP006261.1-201ENST00000584783 668 ntBASIC19.52■□□□□ 0.72
IGHV4-28A0A0C4DH34 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IGHV4-28A0A0C4DH34 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGHV4-28A0A0C4DH34 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.51■□□□□ 0.71
IGHV4-28A0A0C4DH34 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGHV4-28A0A0C4DH34 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGHV4-28A0A0C4DH34 RPS2P35-201ENST00000443417 897 ntBASIC19.5■□□□□ 0.71
IGHV4-28A0A0C4DH34 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGHV4-28A0A0C4DH34 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.49■□□□□ 0.71
IGHV4-28A0A0C4DH34 MIR762-201ENST00000390236 83 ntBASIC19.48■□□□□ 0.71
IGHV4-28A0A0C4DH34 AL162393.1-201ENST00000437852 946 ntBASIC19.48■□□□□ 0.71
IGHV4-28A0A0C4DH34 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.48■□□□□ 0.71
IGHV4-28A0A0C4DH34 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.47■□□□□ 0.71
IGHV4-28A0A0C4DH34 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGHV4-28A0A0C4DH34 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IGHV4-28A0A0C4DH34 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.45■□□□□ 0.7
IGHV4-28A0A0C4DH34 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.45■□□□□ 0.7
IGHV4-28A0A0C4DH34 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IGHV4-28A0A0C4DH34 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.45■□□□□ 0.7
IGHV4-28A0A0C4DH34 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGHV4-28A0A0C4DH34 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
IGHV4-28A0A0C4DH34 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
IGHV4-28A0A0C4DH34 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.44■□□□□ 0.7
IGHV4-28A0A0C4DH34 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGHV4-28A0A0C4DH34 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
IGHV4-28A0A0C4DH34 MIR3665-201ENST00000578708 105 ntBASIC19.43■□□□□ 0.7
IGHV4-28A0A0C4DH34 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
IGHV4-28A0A0C4DH34 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IGHV4-28A0A0C4DH34 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.42■□□□□ 0.7
IGHV4-28A0A0C4DH34 AC005559.1-201ENST00000589661 871 ntBASIC19.42■□□□□ 0.7
IGHV4-28A0A0C4DH34 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IGHV4-28A0A0C4DH34 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGHV4-28A0A0C4DH34 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
IGHV4-28A0A0C4DH34 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGHV4-28A0A0C4DH34 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IGHV4-28A0A0C4DH34 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGHV4-28A0A0C4DH34 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IGHV4-28A0A0C4DH34 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGHV4-28A0A0C4DH34 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
IGHV4-28A0A0C4DH34 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGHV4-28A0A0C4DH34 DUX4L28-201ENST00000623687 678 ntBASIC19.39■□□□□ 0.69
IGHV4-28A0A0C4DH34 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGHV4-28A0A0C4DH34 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
IGHV4-28A0A0C4DH34 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGHV4-28A0A0C4DH34 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGHV4-28A0A0C4DH34 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGHV4-28A0A0C4DH34 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IGHV4-28A0A0C4DH34 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IGHV4-28A0A0C4DH34 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IGHV4-28A0A0C4DH34 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IGHV4-28A0A0C4DH34 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.34■□□□□ 0.69
IGHV4-28A0A0C4DH34 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IGHV4-28A0A0C4DH34 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IGHV4-28A0A0C4DH34 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.33■□□□□ 0.68
IGHV4-28A0A0C4DH34 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
IGHV4-28A0A0C4DH34 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
IGHV4-28A0A0C4DH34 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.33■□□□□ 0.68
IGHV4-28A0A0C4DH34 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IGHV4-28A0A0C4DH34 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV4-28A0A0C4DH34 AC087741.3-201ENST00000624270 1347 ntBASIC19.31■□□□□ 0.68
IGHV4-28A0A0C4DH34 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV4-28A0A0C4DH34 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.31■□□□□ 0.68
IGHV4-28A0A0C4DH34 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.31■□□□□ 0.68
IGHV4-28A0A0C4DH34 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGHV4-28A0A0C4DH34 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IGHV4-28A0A0C4DH34 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.29■□□□□ 0.68
IGHV4-28A0A0C4DH34 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGHV4-28A0A0C4DH34 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGHV4-28A0A0C4DH34 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.27■□□□□ 0.68
IGHV4-28A0A0C4DH34 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
IGHV4-28A0A0C4DH34 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IGHV4-28A0A0C4DH34 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
IGHV4-28A0A0C4DH34 AC044849.2-201ENST00000606596 710 ntBASIC19.26■□□□□ 0.67
IGHV4-28A0A0C4DH34 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGHV4-28A0A0C4DH34 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGHV4-28A0A0C4DH34 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGHV4-28A0A0C4DH34 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
IGHV4-28A0A0C4DH34 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.25■□□□□ 0.67
IGHV4-28A0A0C4DH34 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGHV4-28A0A0C4DH34 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV4-28A0A0C4DH34 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV4-28A0A0C4DH34 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms