Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRAV17A0A0B4J275 ABHD17AP4-201ENST00000411545 909 ntBASIC24.93■■□□□ 1.58
TRAV17A0A0B4J275 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TRAV17A0A0B4J275 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
TRAV17A0A0B4J275 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRAV17A0A0B4J275 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TRAV17A0A0B4J275 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
TRAV17A0A0B4J275 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRAV17A0A0B4J275 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
TRAV17A0A0B4J275 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
TRAV17A0A0B4J275 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TRAV17A0A0B4J275 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRAV17A0A0B4J275 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.87■■□□□ 1.57
TRAV17A0A0B4J275 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.86■■□□□ 1.57
TRAV17A0A0B4J275 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.86■■□□□ 1.57
TRAV17A0A0B4J275 MIR7108-201ENST00000614319 87 ntBASIC24.86■■□□□ 1.57
TRAV17A0A0B4J275 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRAV17A0A0B4J275 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TRAV17A0A0B4J275 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.84■■□□□ 1.57
TRAV17A0A0B4J275 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TRAV17A0A0B4J275 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.83■■□□□ 1.57
TRAV17A0A0B4J275 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
TRAV17A0A0B4J275 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.83■■□□□ 1.56
TRAV17A0A0B4J275 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TRAV17A0A0B4J275 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.81■■□□□ 1.56
TRAV17A0A0B4J275 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV17A0A0B4J275 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRAV17A0A0B4J275 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRAV17A0A0B4J275 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.79■■□□□ 1.56
TRAV17A0A0B4J275 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRAV17A0A0B4J275 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRAV17A0A0B4J275 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRAV17A0A0B4J275 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
TRAV17A0A0B4J275 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
TRAV17A0A0B4J275 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.77■■□□□ 1.56
TRAV17A0A0B4J275 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRAV17A0A0B4J275 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRAV17A0A0B4J275 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRAV17A0A0B4J275 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRAV17A0A0B4J275 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.76■■□□□ 1.55
TRAV17A0A0B4J275 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.76■■□□□ 1.55
TRAV17A0A0B4J275 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRAV17A0A0B4J275 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRAV17A0A0B4J275 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.75■■□□□ 1.55
TRAV17A0A0B4J275 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRAV17A0A0B4J275 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.74■■□□□ 1.55
TRAV17A0A0B4J275 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRAV17A0A0B4J275 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
TRAV17A0A0B4J275 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.71■■□□□ 1.55
TRAV17A0A0B4J275 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.71■■□□□ 1.55
TRAV17A0A0B4J275 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.7■■□□□ 1.54
TRAV17A0A0B4J275 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.7■■□□□ 1.54
TRAV17A0A0B4J275 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
TRAV17A0A0B4J275 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRAV17A0A0B4J275 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRAV17A0A0B4J275 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRAV17A0A0B4J275 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRAV17A0A0B4J275 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.67■■□□□ 1.54
TRAV17A0A0B4J275 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.67■■□□□ 1.54
TRAV17A0A0B4J275 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.67■■□□□ 1.54
TRAV17A0A0B4J275 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRAV17A0A0B4J275 ZNRF2P2-203ENST00000454624 420 ntBASIC24.66■■□□□ 1.54
TRAV17A0A0B4J275 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRAV17A0A0B4J275 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRAV17A0A0B4J275 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRAV17A0A0B4J275 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.65■■□□□ 1.54
TRAV17A0A0B4J275 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRAV17A0A0B4J275 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TRAV17A0A0B4J275 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRAV17A0A0B4J275 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.63■■□□□ 1.53
TRAV17A0A0B4J275 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.63■■□□□ 1.53
TRAV17A0A0B4J275 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRAV17A0A0B4J275 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.61■■□□□ 1.53
TRAV17A0A0B4J275 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TRAV17A0A0B4J275 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.61■■□□□ 1.53
TRAV17A0A0B4J275 DUX4L29-201ENST00000425409 679 ntBASIC24.61■■□□□ 1.53
TRAV17A0A0B4J275 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
TRAV17A0A0B4J275 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
TRAV17A0A0B4J275 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TRAV17A0A0B4J275 HLA-V-202ENST00000446817 847 ntBASIC24.59■■□□□ 1.53
TRAV17A0A0B4J275 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRAV17A0A0B4J275 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.59■■□□□ 1.53
TRAV17A0A0B4J275 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.58■■□□□ 1.53
TRAV17A0A0B4J275 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRAV17A0A0B4J275 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRAV17A0A0B4J275 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.57■■□□□ 1.52
TRAV17A0A0B4J275 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
TRAV17A0A0B4J275 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.57■■□□□ 1.52
TRAV17A0A0B4J275 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRAV17A0A0B4J275 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRAV17A0A0B4J275 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.55■■□□□ 1.52
TRAV17A0A0B4J275 AC108673.1-201ENST00000510422 1159 ntBASIC24.55■■□□□ 1.52
TRAV17A0A0B4J275 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.55■■□□□ 1.52
TRAV17A0A0B4J275 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRAV17A0A0B4J275 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.55■■□□□ 1.52
TRAV17A0A0B4J275 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRAV17A0A0B4J275 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRAV17A0A0B4J275 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRAV17A0A0B4J275 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRAV17A0A0B4J275 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms