Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV16A0A0A6YYK6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV16A0A0A6YYK6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV16A0A0A6YYK6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAV16A0A0A6YYK6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV16A0A0A6YYK6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV16A0A0A6YYK6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRAV16A0A0A6YYK6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV16A0A0A6YYK6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAV16A0A0A6YYK6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV16A0A0A6YYK6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV16A0A0A6YYK6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV16A0A0A6YYK6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV16A0A0A6YYK6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV16A0A0A6YYK6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV16A0A0A6YYK6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV16A0A0A6YYK6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV16A0A0A6YYK6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV16A0A0A6YYK6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV16A0A0A6YYK6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRAV16A0A0A6YYK6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV16A0A0A6YYK6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV16A0A0A6YYK6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV16A0A0A6YYK6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV16A0A0A6YYK6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV16A0A0A6YYK6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV16A0A0A6YYK6 AP002365.1-201ENST00000603448 772 ntBASIC18.54■□□□□ 0.56
TRAV16A0A0A6YYK6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV16A0A0A6YYK6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV16A0A0A6YYK6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV16A0A0A6YYK6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV16A0A0A6YYK6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV16A0A0A6YYK6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV16A0A0A6YYK6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV16A0A0A6YYK6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV16A0A0A6YYK6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
TRAV16A0A0A6YYK6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV16A0A0A6YYK6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV16A0A0A6YYK6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV16A0A0A6YYK6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV16A0A0A6YYK6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV16A0A0A6YYK6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV16A0A0A6YYK6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV16A0A0A6YYK6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV16A0A0A6YYK6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRAV16A0A0A6YYK6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 DYNLL1-208ENST00000550178 581 ntBASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV16A0A0A6YYK6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV16A0A0A6YYK6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV16A0A0A6YYK6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV16A0A0A6YYK6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV16A0A0A6YYK6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV16A0A0A6YYK6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV16A0A0A6YYK6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV16A0A0A6YYK6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV16A0A0A6YYK6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV16A0A0A6YYK6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV16A0A0A6YYK6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV16A0A0A6YYK6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV16A0A0A6YYK6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
TRAV16A0A0A6YYK6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TRAV16A0A0A6YYK6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms