Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV16A0A0A6YYK6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV16A0A0A6YYK6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV16A0A0A6YYK6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV16A0A0A6YYK6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAV16A0A0A6YYK6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV16A0A0A6YYK6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV16A0A0A6YYK6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRAV16A0A0A6YYK6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV16A0A0A6YYK6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAV16A0A0A6YYK6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV16A0A0A6YYK6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV16A0A0A6YYK6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV16A0A0A6YYK6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV16A0A0A6YYK6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV16A0A0A6YYK6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV16A0A0A6YYK6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV16A0A0A6YYK6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV16A0A0A6YYK6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV16A0A0A6YYK6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV16A0A0A6YYK6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV16A0A0A6YYK6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRAV16A0A0A6YYK6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV16A0A0A6YYK6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV16A0A0A6YYK6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV16A0A0A6YYK6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV16A0A0A6YYK6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV16A0A0A6YYK6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV16A0A0A6YYK6 AP002365.1-201ENST00000603448 772 ntBASIC18.54■□□□□ 0.56
TRAV16A0A0A6YYK6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV16A0A0A6YYK6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV16A0A0A6YYK6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV16A0A0A6YYK6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV16A0A0A6YYK6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV16A0A0A6YYK6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV16A0A0A6YYK6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV16A0A0A6YYK6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV16A0A0A6YYK6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
TRAV16A0A0A6YYK6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV16A0A0A6YYK6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV16A0A0A6YYK6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV16A0A0A6YYK6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV16A0A0A6YYK6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV16A0A0A6YYK6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV16A0A0A6YYK6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV16A0A0A6YYK6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV16A0A0A6YYK6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV16A0A0A6YYK6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV16A0A0A6YYK6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRAV16A0A0A6YYK6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 DYNLL1-208ENST00000550178 581 ntBASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV16A0A0A6YYK6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV16A0A0A6YYK6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV16A0A0A6YYK6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV16A0A0A6YYK6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV16A0A0A6YYK6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV16A0A0A6YYK6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV16A0A0A6YYK6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV16A0A0A6YYK6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV16A0A0A6YYK6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV16A0A0A6YYK6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV16A0A0A6YYK6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV16A0A0A6YYK6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV16A0A0A6YYK6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV16A0A0A6YYK6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV16A0A0A6YYK6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV16A0A0A6YYK6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
TRAV16A0A0A6YYK6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TRAV16A0A0A6YYK6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms