Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 AC139530.1-201ENST00000575312 1977 ntBASIC18.75■□□□□ 0.59
SFTPBP07988 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SFTPBP07988 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SFTPBP07988 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SFTPBP07988 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.74■□□□□ 0.59
SFTPBP07988 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SFTPBP07988 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SFTPBP07988 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.74■□□□□ 0.59
SFTPBP07988 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
SFTPBP07988 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.74■□□□□ 0.59
SFTPBP07988 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SFTPBP07988 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
SFTPBP07988 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SFTPBP07988 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SFTPBP07988 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SFTPBP07988 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.73■□□□□ 0.59
SFTPBP07988 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SFTPBP07988 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SFTPBP07988 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SFTPBP07988 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SFTPBP07988 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SFTPBP07988 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.73■□□□□ 0.59
SFTPBP07988 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SFTPBP07988 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.73■□□□□ 0.59
SFTPBP07988 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SFTPBP07988 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SFTPBP07988 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SFTPBP07988 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SFTPBP07988 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SFTPBP07988 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SFTPBP07988 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SFTPBP07988 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SFTPBP07988 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SFTPBP07988 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.72■□□□□ 0.59
SFTPBP07988 AC009086.3-201ENST00000623486 1008 ntBASIC18.72■□□□□ 0.59
SFTPBP07988 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SFTPBP07988 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPBP07988 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SFTPBP07988 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.71■□□□□ 0.59
SFTPBP07988 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPBP07988 C17orf82-201ENST00000623772 1530 ntBASIC18.71■□□□□ 0.59
SFTPBP07988 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPBP07988 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.71■□□□□ 0.59
SFTPBP07988 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.71■□□□□ 0.59
SFTPBP07988 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SFTPBP07988 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPBP07988 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SFTPBP07988 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SFTPBP07988 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.71■□□□□ 0.58
SFTPBP07988 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPBP07988 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.7■□□□□ 0.58
SFTPBP07988 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPBP07988 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.7■□□□□ 0.58
SFTPBP07988 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPBP07988 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPBP07988 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SFTPBP07988 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPBP07988 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.7■□□□□ 0.58
SFTPBP07988 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPBP07988 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SFTPBP07988 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPBP07988 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.69■□□□□ 0.58
SFTPBP07988 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SFTPBP07988 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.69■□□□□ 0.58
SFTPBP07988 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SFTPBP07988 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 AC092053.2-201ENST00000640557 1818 ntBASIC18.69■□□□□ 0.58
SFTPBP07988 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPBP07988 LINC01960-201ENST00000563759 1884 ntBASIC18.69■□□□□ 0.58
SFTPBP07988 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.69■□□□□ 0.58
SFTPBP07988 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.68■□□□□ 0.58
SFTPBP07988 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SFTPBP07988 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
SFTPBP07988 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPBP07988 AC004687.1-201ENST00000579003 1625 ntBASIC18.68■□□□□ 0.58
SFTPBP07988 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SFTPBP07988 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms