RNA–Protein interactions for RNA: ENST00000367976.3

CTGF-201, Transcript of connective tissue growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTGF, Length 2,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTGF-201ENST00000367976 NISCHQ9Y2I1 1504 aa43.88■■■■■ 4.62
CTGF-201ENST00000367976 CCDC180Q9P1Z9 1646 aa38.01■■■■□ 3.67
CTGF-201ENST00000367976 SHROOM4Q9ULL8 1493 aa37.05■■■■□ 3.52
CTGF-201ENST00000367976 ZCCHC6Q5VYS8 1495 aaKnown RBP36.88■■■■□ 3.5
CTGF-201ENST00000367976 DCAF8L2P0C7V8 631 aa36.65■■■■□ 3.46
CTGF-201ENST00000367976 SUPT5HO00267 1087 aaKnown RBP36.49■■■■□ 3.43
CTGF-201ENST00000367976 ABCC9O60706 1549 aa36.2■■■■□ 3.39
CTGF-201ENST00000367976 DCAF1Q9Y4B6 1507 aa36.04■■■■□ 3.36
CTGF-201ENST00000367976 CHIC1Q5VXU3 224 aa35.73■■■■□ 3.31
CTGF-201ENST00000367976 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
CTGF-201ENST00000367976 NACADO15069 1562 aa35.38■■■■□ 3.25
CTGF-201ENST00000367976 SCRIBQ14160 1630 aa35.36■■■■□ 3.25
CTGF-201ENST00000367976 HRCP23327 699 aa35.2■■■■□ 3.22
CTGF-201ENST00000367976 RB1CC1Q8TDY2 1594 aa35.11■■■■□ 3.21
CTGF-201ENST00000367976 PCGF6Q9BYE7 350 aa34.87■■■■□ 3.17
CTGF-201ENST00000367976 LOC105371045A0A1W2PR82 267 aa34.58■■■■□ 3.13
CTGF-201ENST00000367976 UNC13AQ9UPW8 1703 aa34.57■■■■□ 3.12
CTGF-201ENST00000367976 RSF1Q96T23 1441 aaPredicted RBP34.45■■■■□ 3.11
CTGF-201ENST00000367976 CECR2Q9BXF3 1484 aa34.29■■■■□ 3.08
CTGF-201ENST00000367976 PABPN1Q86U42 306 aaKnown RBP eCLIP34.29■■■■□ 3.08
CTGF-201ENST00000367976 PPARGC1BQ86YN6 1023 aaKnown RBP34.26■■■■□ 3.08
CTGF-201ENST00000367976 TRIM26Q12899 539 aaPredicted RBP34.24■■■■□ 3.07
CTGF-201ENST00000367976 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
CTGF-201ENST00000367976 MROH2BQ7Z745 1585 aa34.05■■■■□ 3.04
CTGF-201ENST00000367976 TRIM41Q8WV44 630 aa34.04■■■■□ 3.04
CTGF-201ENST00000367976 WIZO95785 1651 aa33.83■■■■□ 3.01
CTGF-201ENST00000367976 BAZ1AQ9NRL2 1556 aaPredicted RBP33.83■■■■□ 3.01
CTGF-201ENST00000367976 SMARCA4P51532 1647 aa33.72■■■□□ 2.99
CTGF-201ENST00000367976 ZEB1P37275 1124 aaPredicted RBP33.7■■■□□ 2.99
CTGF-201ENST00000367976 FAM9AQ8IZU1 332 aaPredicted RBP33.67■■■□□ 2.98
CTGF-201ENST00000367976 EIF4G1Q04637 1599 aaKnown RBP33.36■■■□□ 2.93
CTGF-201ENST00000367976 TOP2AP11388 1531 aaKnown RBP33.29■■■□□ 2.92
CTGF-201ENST00000367976 EHMT2Q96KQ7 1210 aa33.28■■■□□ 2.92
CTGF-201ENST00000367976 PEG3Q9GZU2 1588 aa33.13■■■□□ 2.89
CTGF-201ENST00000367976 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
CTGF-201ENST00000367976 CCDC88BA6NC98 1476 aa33.07■■■□□ 2.88
CTGF-201ENST00000367976 SMARCA2P51531 1590 aa33.06■■■□□ 2.88
CTGF-201ENST00000367976 BAZ1BQ9UIG0 1483 aaKnown RBP32.98■■■□□ 2.87
CTGF-201ENST00000367976 ABCC8Q09428 1581 aa32.9■■■□□ 2.86
CTGF-201ENST00000367976 WRNQ14191 1432 aaPredicted RBP eCLIP32.84■■■□□ 2.85
CTGF-201ENST00000367976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.71■■■□□ 2.83
CTGF-201ENST00000367976 CEP162Q5TB80 1403 aa32.7■■■□□ 2.83
CTGF-201ENST00000367976 CCER1Q8TC90 406 aaPredicted RBP32.69■■■□□ 2.82
CTGF-201ENST00000367976 NCAPD3P42695 1498 aa32.69■■■□□ 2.82
CTGF-201ENST00000367976 EEA1Q15075 1411 aa32.69■■■□□ 2.82
CTGF-201ENST00000367976 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
CTGF-201ENST00000367976 SOGA1O94964 1423 aa32.65■■■□□ 2.82
CTGF-201ENST00000367976 HMGXB3Q12766 1538 aa32.64■■■□□ 2.82
CTGF-201ENST00000367976 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
CTGF-201ENST00000367976 SCAF1Q9H7N4 1312 aaKnown RBP32.56■■■□□ 2.8
CTGF-201ENST00000367976 CSRNP3Q8WYN3 585 aa32.51■■■□□ 2.8
CTGF-201ENST00000367976 RUSC2Q8N2Y8 1516 aa32.45■■■□□ 2.79
CTGF-201ENST00000367976 GOLGA3Q08378 1498 aa32.43■■■□□ 2.78
CTGF-201ENST00000367976 PELP1Q8IZL8 1130 aaKnown RBP32.42■■■□□ 2.78
CTGF-201ENST00000367976 UBTFP17480 764 aaKnown RBP32.35■■■□□ 2.77
CTGF-201ENST00000367976 TTBK1Q5TCY1 1321 aaPredicted RBP32.33■■■□□ 2.77
CTGF-201ENST00000367976 DIEXFQ68CQ4 756 aaKnown RBP32.24■■■□□ 2.75
CTGF-201ENST00000367976 KIF21BO75037 1637 aa32.22■■■□□ 2.75
CTGF-201ENST00000367976 CEP164Q9UPV0 1460 aa32.22■■■□□ 2.75
CTGF-201ENST00000367976 ACIN1Q9UKV3 1341 aaKnown RBP32.21■■■□□ 2.75
CTGF-201ENST00000367976 SYNJ1O43426 1573 aa32.2■■■□□ 2.74
CTGF-201ENST00000367976 NEUROD1Q13562 356 aa32.08■■■□□ 2.73
CTGF-201ENST00000367976 CFTRP13569 1480 aa32.07■■■□□ 2.72
CTGF-201ENST00000367976 DNAJC5BQ9UF47 199 aa32.06■■■□□ 2.72
CTGF-201ENST00000367976 CLIP1P30622 1438 aa32.03■■■□□ 2.72
CTGF-201ENST00000367976 CENPBP07199 599 aaPredicted RBP32.01■■■□□ 2.72
CTGF-201ENST00000367976 VPS8Q8N3P4 1428 aa31.97■■■□□ 2.71
CTGF-201ENST00000367976 CADPSQ9ULU8 1353 aa31.96■■■□□ 2.71
CTGF-201ENST00000367976 ZNF316A6NFI3 1004 aaPredicted RBP31.95■■■□□ 2.71
CTGF-201ENST00000367976 RAPGEF2Q9Y4G8 1499 aa31.87■■■□□ 2.69
CTGF-201ENST00000367976 PRDM2Q13029 1718 aa31.87■■■□□ 2.69
CTGF-201ENST00000367976 NESP48681 1621 aa31.86■■■□□ 2.69
CTGF-201ENST00000367976 TOP2BQ02880 1626 aa31.83■■■□□ 2.69
CTGF-201ENST00000367976 CUX1P39880 1505 aa31.8■■■□□ 2.68
CTGF-201ENST00000367976 HNRNPUL2Q1KMD3 747 aaKnown RBP31.79■■■□□ 2.68
CTGF-201ENST00000367976 GTF3C3Q9Y5Q9 886 aa31.79■■■□□ 2.68
CTGF-201ENST00000367976 BIVM-ERCC5R4GMW8 1640 aa31.76■■■□□ 2.67
CTGF-201ENST00000367976 APLP2Q06481 763 aa31.75■■■□□ 2.67
CTGF-201ENST00000367976 FANCD2Q9BXW9 1451 aa31.67■■■□□ 2.66
CTGF-201ENST00000367976 ERICH3Q5RHP9 1530 aa31.66■■■□□ 2.66
CTGF-201ENST00000367976 PRXQ9BXM0 1461 aa31.58■■■□□ 2.65
CTGF-201ENST00000367976 LAMC3Q9Y6N6 1575 aa31.55■■■□□ 2.64
CTGF-201ENST00000367976 RANGAP1P46060 587 aaPredicted RBP31.5■■■□□ 2.63
CTGF-201ENST00000367976 ARAP1Q96P48 1450 aa31.49■■■□□ 2.63
CTGF-201ENST00000367976 MIER1Q8N108 512 aa31.47■■■□□ 2.63
CTGF-201ENST00000367976 CLSPNQ9HAW4 1339 aa31.47■■■□□ 2.63
CTGF-201ENST00000367976 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
CTGF-201ENST00000367976 YTHDC1Q96MU7 727 aaKnown RBP31.4■■■□□ 2.62
CTGF-201ENST00000367976 KIF21AQ7Z4S6 1674 aa31.37■■■□□ 2.61
CTGF-201ENST00000367976 KIF27Q86VH2 1401 aa31.35■■■□□ 2.61
CTGF-201ENST00000367976 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
CTGF-201ENST00000367976 DHX57Q6P158 1386 aaKnown RBP31.34■■■□□ 2.61
CTGF-201ENST00000367976 TOPBP1Q92547 1522 aa31.34■■■□□ 2.61
CTGF-201ENST00000367976 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
CTGF-201ENST00000367976 URB2Q14146 1524 aaKnown RBP31.3■■■□□ 2.6
CTGF-201ENST00000367976 RRBP1Q9P2E9 1410 aaKnown RBP31.29■■■□□ 2.6
CTGF-201ENST00000367976 CUX2O14529 1486 aa31.29■■■□□ 2.6
CTGF-201ENST00000367976 KANK4Q5T7N3 995 aaPredicted RBP31.27■■■□□ 2.6
CTGF-201ENST00000367976 RAD54L2Q9Y4B4 1467 aa31.25■■■□□ 2.59
CTGF-201ENST00000367976 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms