RNA–Protein interactions for RNA: ENST00000220584.8

FDFT1-201, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDFT1, Length 2,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-201ENST00000220584 NISCHQ9Y2I1 1504 aa46.83■■■■■ 5.09
FDFT1-201ENST00000220584 CCDC180Q9P1Z9 1646 aa40.8■■■■■ 4.12
FDFT1-201ENST00000220584 ZCCHC6Q5VYS8 1495 aaKnown RBP39.43■■■■□ 3.9
FDFT1-201ENST00000220584 SHROOM4Q9ULL8 1493 aa38.92■■■■□ 3.82
FDFT1-201ENST00000220584 DCAF8L2P0C7V8 631 aa38.77■■■■□ 3.8
FDFT1-201ENST00000220584 ABCC9O60706 1549 aa38.73■■■■□ 3.79
FDFT1-201ENST00000220584 DCAF1Q9Y4B6 1507 aa38.63■■■■□ 3.77
FDFT1-201ENST00000220584 MYO15BQ96JP2 1530 aa38.15■■■■□ 3.7
FDFT1-201ENST00000220584 NACADO15069 1562 aa37.98■■■■□ 3.67
FDFT1-201ENST00000220584 SUPT5HO00267 1087 aaKnown RBP37.89■■■■□ 3.66
FDFT1-201ENST00000220584 RB1CC1Q8TDY2 1594 aa37.68■■■■□ 3.62
FDFT1-201ENST00000220584 SCRIBQ14160 1630 aa37.65■■■■□ 3.62
FDFT1-201ENST00000220584 UNC13AQ9UPW8 1703 aa37.08■■■■□ 3.53
FDFT1-201ENST00000220584 CHIC1Q5VXU3 224 aa36.7■■■■□ 3.47
FDFT1-201ENST00000220584 BICRAQ9NZM4 1560 aa36.66■■■■□ 3.46
FDFT1-201ENST00000220584 RSF1Q96T23 1441 aaPredicted RBP36.61■■■■□ 3.45
FDFT1-201ENST00000220584 PABPN1Q86U42 306 aaKnown RBP eCLIP36.54■■■■□ 3.44
FDFT1-201ENST00000220584 CECR2Q9BXF3 1484 aa36.49■■■■□ 3.43
FDFT1-201ENST00000220584 MROH2BQ7Z745 1585 aa36.25■■■■□ 3.39
FDFT1-201ENST00000220584 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.37
FDFT1-201ENST00000220584 SMARCA4P51532 1647 aa36.03■■■■□ 3.36
FDFT1-201ENST00000220584 WIZO95785 1651 aa35.99■■■■□ 3.35
FDFT1-201ENST00000220584 TOP2AP11388 1531 aaKnown RBP35.55■■■■□ 3.28
FDFT1-201ENST00000220584 PEG3Q9GZU2 1588 aa35.53■■■■□ 3.28
FDFT1-201ENST00000220584 EIF4G1Q04637 1599 aaKnown RBP35.51■■■■□ 3.28
FDFT1-201ENST00000220584 TRIM41Q8WV44 630 aa35.49■■■■□ 3.27
FDFT1-201ENST00000220584 ATAD2BQ9ULI0 1458 aa35.42■■■■□ 3.26
FDFT1-201ENST00000220584 LOC105371045A0A1W2PR82 267 aa35.39■■■■□ 3.26
FDFT1-201ENST00000220584 SMARCA2P51531 1590 aa35.34■■■■□ 3.25
FDFT1-201ENST00000220584 CCDC88BA6NC98 1476 aa35.22■■■■□ 3.23
FDFT1-201ENST00000220584 BAZ1BQ9UIG0 1483 aaKnown RBP35.21■■■■□ 3.23
FDFT1-201ENST00000220584 NCAPD3P42695 1498 aa35.08■■■■□ 3.21
FDFT1-201ENST00000220584 HMGXB3Q12766 1538 aa35.02■■■■□ 3.2
FDFT1-201ENST00000220584 CC2D2AQ9P2K1 1620 aa35.02■■■■□ 3.2
FDFT1-201ENST00000220584 FAM9AQ8IZU1 332 aaPredicted RBP34.96■■■■□ 3.19
FDFT1-201ENST00000220584 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
FDFT1-201ENST00000220584 PCGF6Q9BYE7 350 aa34.77■■■■□ 3.16
FDFT1-201ENST00000220584 EHMT2Q96KQ7 1210 aa34.5■■■■□ 3.11
FDFT1-201ENST00000220584 HRCP23327 699 aa34.49■■■■□ 3.11
FDFT1-201ENST00000220584 TRIM26Q12899 539 aaPredicted RBP34.47■■■■□ 3.11
FDFT1-201ENST00000220584 WRNQ14191 1432 aaPredicted RBP eCLIP34.44■■■■□ 3.1
FDFT1-201ENST00000220584 EEA1Q15075 1411 aa34.39■■■■□ 3.1
FDFT1-201ENST00000220584 SOGA1O94964 1423 aa34.35■■■■□ 3.09
FDFT1-201ENST00000220584 CFTRP13569 1480 aa34.32■■■■□ 3.08
FDFT1-201ENST00000220584 SYNJ1O43426 1573 aa34.31■■■■□ 3.08
FDFT1-201ENST00000220584 DNAJC5BQ9UF47 199 aa34.29■■■■□ 3.08
FDFT1-201ENST00000220584 RUSC2Q8N2Y8 1516 aa34.19■■■■□ 3.06
FDFT1-201ENST00000220584 CADPSQ9ULU8 1353 aa34.19■■■■□ 3.06
FDFT1-201ENST00000220584 PRDM2Q13029 1718 aa34.17■■■■□ 3.06
FDFT1-201ENST00000220584 CSRNP3Q8WYN3 585 aa34.15■■■■□ 3.06
FDFT1-201ENST00000220584 TNIKQ9UKE5 1360 aa34.07■■■■□ 3.04
FDFT1-201ENST00000220584 TOP2BQ02880 1626 aa34.06■■■■□ 3.04
FDFT1-201ENST00000220584 NESP48681 1621 aa34.03■■■■□ 3.04
FDFT1-201ENST00000220584 BIVM-ERCC5R4GMW8 1640 aa34.03■■■■□ 3.04
FDFT1-201ENST00000220584 GOLGA3Q08378 1498 aa34.02■■■■□ 3.04
FDFT1-201ENST00000220584 CEP162Q5TB80 1403 aa34■■■■□ 3.03
FDFT1-201ENST00000220584 KIF21BO75037 1637 aa33.96■■■■□ 3.03
FDFT1-201ENST00000220584 CEP164Q9UPV0 1460 aa33.91■■■■□ 3.02
FDFT1-201ENST00000220584 LAMC3Q9Y6N6 1575 aa33.89■■■■□ 3.02
FDFT1-201ENST00000220584 CUX1P39880 1505 aa33.88■■■■□ 3.01
FDFT1-201ENST00000220584 UBTFP17480 764 aaKnown RBP33.87■■■■□ 3.01
FDFT1-201ENST00000220584 FANCD2Q9BXW9 1451 aa33.85■■■■□ 3.01
FDFT1-201ENST00000220584 PPARGC1BQ86YN6 1023 aaKnown RBP33.71■■■□□ 2.99
FDFT1-201ENST00000220584 RAPGEF2Q9Y4G8 1499 aa33.61■■■□□ 2.97
FDFT1-201ENST00000220584 KIF21AQ7Z4S6 1674 aa33.6■■■□□ 2.97
FDFT1-201ENST00000220584 PDS5BQ9NTI5 1447 aa33.6■■■□□ 2.97
FDFT1-201ENST00000220584 ZEB1P37275 1124 aaPredicted RBP33.55■■■□□ 2.96
FDFT1-201ENST00000220584 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
FDFT1-201ENST00000220584 DNMBPQ6XZF7 1577 aa33.52■■■□□ 2.96
FDFT1-201ENST00000220584 CLIP1P30622 1438 aa33.52■■■□□ 2.96
FDFT1-201ENST00000220584 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
FDFT1-201ENST00000220584 TOPBP1Q92547 1522 aa33.49■■■□□ 2.95
FDFT1-201ENST00000220584 PRXQ9BXM0 1461 aa33.47■■■□□ 2.95
FDFT1-201ENST00000220584 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
FDFT1-201ENST00000220584 URB2Q14146 1524 aaKnown RBP33.47■■■□□ 2.95
FDFT1-201ENST00000220584 VPS8Q8N3P4 1428 aa33.34■■■□□ 2.93
FDFT1-201ENST00000220584 POLA1P09884 1462 aaPredicted RBP33.34■■■□□ 2.93
FDFT1-201ENST00000220584 TTBK1Q5TCY1 1321 aaPredicted RBP33.28■■■□□ 2.92
FDFT1-201ENST00000220584 RAD54L2Q9Y4B4 1467 aa33.28■■■□□ 2.92
FDFT1-201ENST00000220584 CUX2O14529 1486 aa33.27■■■□□ 2.92
FDFT1-201ENST00000220584 MRC2Q9UBG0 1479 aa33.21■■■□□ 2.91
FDFT1-201ENST00000220584 ABCA10Q8WWZ4 1543 aa33.15■■■□□ 2.9
FDFT1-201ENST00000220584 ERCC6Q03468 1493 aa33.13■■■□□ 2.89
FDFT1-201ENST00000220584 RANGAP1P46060 587 aaPredicted RBP33.12■■■□□ 2.89
FDFT1-201ENST00000220584 WDR97A6NE52 1622 aa33.11■■■□□ 2.89
FDFT1-201ENST00000220584 ARAP1Q96P48 1450 aa33.08■■■□□ 2.89
FDFT1-201ENST00000220584 IGF1RP08069 1367 aa33.07■■■□□ 2.88
FDFT1-201ENST00000220584 APLP2Q06481 763 aa33.06■■■□□ 2.88
FDFT1-201ENST00000220584 WDR62O43379 1518 aa33.05■■■□□ 2.88
FDFT1-201ENST00000220584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.03■■■□□ 2.88
FDFT1-201ENST00000220584 TARBP1Q13395 1621 aaKnown RBP33.02■■■□□ 2.88
FDFT1-201ENST00000220584 THOC2Q8NI27 1593 aaKnown RBP33■■■□□ 2.87
FDFT1-201ENST00000220584 CCER1Q8TC90 406 aaPredicted RBP32.99■■■□□ 2.87
FDFT1-201ENST00000220584 CARMIL1Q5VZK9 1371 aa32.94■■■□□ 2.86
FDFT1-201ENST00000220584 TDRD9Q8NDG6 1382 aaKnown RBP32.94■■■□□ 2.86
FDFT1-201ENST00000220584 ABCA5Q8WWZ7 1642 aa32.93■■■□□ 2.86
FDFT1-201ENST00000220584 ARHGAP35Q9NRY4 1499 aa32.89■■■□□ 2.86
FDFT1-201ENST00000220584 GAPVD1Q14C86 1478 aa32.83■■■□□ 2.85
FDFT1-201ENST00000220584 IFT140Q96RY7 1462 aa32.78■■■□□ 2.84
FDFT1-201ENST00000220584 CUL7Q14999 1698 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms