RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 NISCHQ9Y2I1 1504 aa48.97■■■■■ 5.43
NHLRC4-202ENST00000540585 CCDC180Q9P1Z9 1646 aa43.18■■■■■ 4.5
NHLRC4-202ENST00000540585 ABCC9O60706 1549 aa41.55■■■■■ 4.24
NHLRC4-202ENST00000540585 ZCCHC6Q5VYS8 1495 aaKnown RBP40.96■■■■■ 4.15
NHLRC4-202ENST00000540585 DCAF8L2P0C7V8 631 aa40.6■■■■■ 4.09
NHLRC4-202ENST00000540585 DCAF1Q9Y4B6 1507 aa40.52■■■■■ 4.08
NHLRC4-202ENST00000540585 NACADO15069 1562 aa40.4■■■■■ 4.06
NHLRC4-202ENST00000540585 MYO15BQ96JP2 1530 aa40.38■■■■■ 4.06
NHLRC4-202ENST00000540585 RB1CC1Q8TDY2 1594 aa40.26■■■■■ 4.04
NHLRC4-202ENST00000540585 SHROOM4Q9ULL8 1493 aa39.61■■■■□ 3.93
NHLRC4-202ENST00000540585 SCRIBQ14160 1630 aa39.52■■■■□ 3.92
NHLRC4-202ENST00000540585 UNC13AQ9UPW8 1703 aa39.46■■■■□ 3.91
NHLRC4-202ENST00000540585 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
NHLRC4-202ENST00000540585 PABPN1Q86U42 306 aaKnown RBP eCLIP38.96■■■■□ 3.83
NHLRC4-202ENST00000540585 SUPT5HO00267 1087 aaKnown RBP38.37■■■■□ 3.73
NHLRC4-202ENST00000540585 CECR2Q9BXF3 1484 aa38.1■■■■□ 3.69
NHLRC4-202ENST00000540585 EIF4G1Q04637 1599 aaKnown RBP37.95■■■■□ 3.67
NHLRC4-202ENST00000540585 BAZ1AQ9NRL2 1556 aaPredicted RBP37.88■■■■□ 3.66
NHLRC4-202ENST00000540585 SMARCA4P51532 1647 aa37.85■■■■□ 3.65
NHLRC4-202ENST00000540585 MROH2BQ7Z745 1585 aa37.79■■■■□ 3.64
NHLRC4-202ENST00000540585 CC2D2AQ9P2K1 1620 aa37.62■■■■□ 3.61
NHLRC4-202ENST00000540585 RSF1Q96T23 1441 aaPredicted RBP37.62■■■■□ 3.61
NHLRC4-202ENST00000540585 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
NHLRC4-202ENST00000540585 PEG3Q9GZU2 1588 aa37.45■■■■□ 3.58
NHLRC4-202ENST00000540585 WIZO95785 1651 aa37.44■■■■□ 3.58
NHLRC4-202ENST00000540585 ATAD2BQ9ULI0 1458 aa37.43■■■■□ 3.58
NHLRC4-202ENST00000540585 SMARCA2P51531 1590 aa37.4■■■■□ 3.58
NHLRC4-202ENST00000540585 NCAPD3P42695 1498 aa37.27■■■■□ 3.56
NHLRC4-202ENST00000540585 HMGXB3Q12766 1538 aa37.17■■■■□ 3.54
NHLRC4-202ENST00000540585 BAZ1BQ9UIG0 1483 aaKnown RBP37.16■■■■□ 3.54
NHLRC4-202ENST00000540585 TOP2AP11388 1531 aaKnown RBP37.04■■■■□ 3.52
NHLRC4-202ENST00000540585 CHIC1Q5VXU3 224 aa37.01■■■■□ 3.52
NHLRC4-202ENST00000540585 CCDC88BA6NC98 1476 aa36.62■■■■□ 3.45
NHLRC4-202ENST00000540585 CADPSQ9ULU8 1353 aa36.23■■■■□ 3.39
NHLRC4-202ENST00000540585 NESP48681 1621 aa36.21■■■■□ 3.39
NHLRC4-202ENST00000540585 CFTRP13569 1480 aa36.19■■■■□ 3.38
NHLRC4-202ENST00000540585 LAMC3Q9Y6N6 1575 aa36.17■■■■□ 3.38
NHLRC4-202ENST00000540585 PRDM2Q13029 1718 aa36.02■■■■□ 3.36
NHLRC4-202ENST00000540585 TRIM41Q8WV44 630 aa35.99■■■■□ 3.35
NHLRC4-202ENST00000540585 PDS5BQ9NTI5 1447 aa35.87■■■■□ 3.33
NHLRC4-202ENST00000540585 FANCD2Q9BXW9 1451 aa35.83■■■■□ 3.33
NHLRC4-202ENST00000540585 KIF21AQ7Z4S6 1674 aa35.81■■■■□ 3.32
NHLRC4-202ENST00000540585 ERCC6Q03468 1493 aa35.71■■■■□ 3.31
NHLRC4-202ENST00000540585 CEP164Q9UPV0 1460 aa35.7■■■■□ 3.31
NHLRC4-202ENST00000540585 LOC105371045A0A1W2PR82 267 aa35.67■■■■□ 3.3
NHLRC4-202ENST00000540585 ABCC8Q09428 1581 aa35.56■■■■□ 3.28
NHLRC4-202ENST00000540585 HRCP23327 699 aa35.5■■■■□ 3.27
NHLRC4-202ENST00000540585 MRC2Q9UBG0 1479 aa35.49■■■■□ 3.27
NHLRC4-202ENST00000540585 THOC2Q8NI27 1593 aaKnown RBP35.48■■■■□ 3.27
NHLRC4-202ENST00000540585 URB2Q14146 1524 aaKnown RBP35.46■■■■□ 3.27
NHLRC4-202ENST00000540585 WRNQ14191 1432 aaPredicted RBP eCLIP35.42■■■■□ 3.26
NHLRC4-202ENST00000540585 FAM9AQ8IZU1 332 aaPredicted RBP35.42■■■■□ 3.26
NHLRC4-202ENST00000540585 CUX1P39880 1505 aa35.41■■■■□ 3.26
NHLRC4-202ENST00000540585 DNMBPQ6XZF7 1577 aa35.37■■■■□ 3.25
NHLRC4-202ENST00000540585 WDR62O43379 1518 aa35.36■■■■□ 3.25
NHLRC4-202ENST00000540585 TOPBP1Q92547 1522 aa35.36■■■■□ 3.25
NHLRC4-202ENST00000540585 SYNJ1O43426 1573 aa35.35■■■■□ 3.25
NHLRC4-202ENST00000540585 TOP2BQ02880 1626 aa35.29■■■■□ 3.24
NHLRC4-202ENST00000540585 BIVM-ERCC5R4GMW8 1640 aa35.28■■■■□ 3.24
NHLRC4-202ENST00000540585 FGD5Q6ZNL6 1462 aa35.14■■■■□ 3.22
NHLRC4-202ENST00000540585 POLA1P09884 1462 aaPredicted RBP35.11■■■■□ 3.21
NHLRC4-202ENST00000540585 CUX2O14529 1486 aa35.04■■■■□ 3.2
NHLRC4-202ENST00000540585 SOGA1O94964 1423 aa34.98■■■■□ 3.19
NHLRC4-202ENST00000540585 RAD54L2Q9Y4B4 1467 aa34.97■■■■□ 3.19
NHLRC4-202ENST00000540585 EHMT2Q96KQ7 1210 aa34.96■■■■□ 3.19
NHLRC4-202ENST00000540585 EEA1Q15075 1411 aa34.95■■■■□ 3.19
NHLRC4-202ENST00000540585 TARBP1Q13395 1621 aaKnown RBP34.93■■■■□ 3.18
NHLRC4-202ENST00000540585 IFT140Q96RY7 1462 aa34.91■■■■□ 3.18
NHLRC4-202ENST00000540585 WDR97A6NE52 1622 aa34.84■■■■□ 3.17
NHLRC4-202ENST00000540585 ABCA10Q8WWZ4 1543 aa34.83■■■■□ 3.17
NHLRC4-202ENST00000540585 RUSC2Q8N2Y8 1516 aa34.82■■■■□ 3.16
NHLRC4-202ENST00000540585 ZNF608Q9ULD9 1512 aaPredicted RBP34.74■■■■□ 3.15
NHLRC4-202ENST00000540585 CSRNP3Q8WYN3 585 aa34.72■■■■□ 3.15
NHLRC4-202ENST00000540585 TDRD9Q8NDG6 1382 aaKnown RBP34.69■■■■□ 3.14
NHLRC4-202ENST00000540585 PCGF6Q9BYE7 350 aa34.69■■■■□ 3.14
NHLRC4-202ENST00000540585 ABCA5Q8WWZ7 1642 aa34.64■■■■□ 3.14
NHLRC4-202ENST00000540585 EIF4G3O43432 1585 aaKnown RBP34.64■■■■□ 3.14
NHLRC4-202ENST00000540585 AQRO60306 1485 aaKnown RBP eCLIP34.64■■■■□ 3.14
NHLRC4-202ENST00000540585 KIF27Q86VH2 1401 aa34.6■■■■□ 3.13
NHLRC4-202ENST00000540585 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
NHLRC4-202ENST00000540585 GOLGA3Q08378 1498 aa34.55■■■■□ 3.12
NHLRC4-202ENST00000540585 TNIKQ9UKE5 1360 aa34.53■■■■□ 3.12
NHLRC4-202ENST00000540585 KIF21BO75037 1637 aa34.51■■■■□ 3.12
NHLRC4-202ENST00000540585 PBRM1Q86U86 1689 aa34.49■■■■□ 3.11
NHLRC4-202ENST00000540585 TRIM26Q12899 539 aaPredicted RBP34.47■■■■□ 3.11
NHLRC4-202ENST00000540585 GRIN2BQ13224 1484 aa34.45■■■■□ 3.11
NHLRC4-202ENST00000540585 CEP162Q5TB80 1403 aa34.45■■■■□ 3.11
NHLRC4-202ENST00000540585 ERICH3Q5RHP9 1530 aa34.41■■■■□ 3.1
NHLRC4-202ENST00000540585 IGF1RP08069 1367 aa34.4■■■■□ 3.1
NHLRC4-202ENST00000540585 UBTFP17480 764 aaKnown RBP34.37■■■■□ 3.09
NHLRC4-202ENST00000540585 PPARGC1BQ86YN6 1023 aaKnown RBP34.37■■■■□ 3.09
NHLRC4-202ENST00000540585 PELP1Q8IZL8 1130 aaKnown RBP34.34■■■■□ 3.09
NHLRC4-202ENST00000540585 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
NHLRC4-202ENST00000540585 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
NHLRC4-202ENST00000540585 CUL7Q14999 1698 aa34.26■■■■□ 3.08
NHLRC4-202ENST00000540585 ADAMTS12P58397 1594 aa34.26■■■■□ 3.07
NHLRC4-202ENST00000540585 RAPGEF2Q9Y4G8 1499 aa34.24■■■■□ 3.07
NHLRC4-202ENST00000540585 CARMIL1Q5VZK9 1371 aa34.19■■■■□ 3.06
NHLRC4-202ENST00000540585 FHAD1B1AJZ9 1412 aa34.19■■■■□ 3.06
NHLRC4-202ENST00000540585 PRXQ9BXM0 1461 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms