RNA–Protein interactions for RNA: ENST00000290776.12

CPNE2-201, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-201ENST00000290776 NISCHQ9Y2I1 1504 aa42.51■■■■■ 4.4
CPNE2-201ENST00000290776 SHROOM4Q9ULL8 1493 aa37■■■■□ 3.51
CPNE2-201ENST00000290776 SUPT5HO00267 1087 aaKnown RBP36.46■■■■□ 3.43
CPNE2-201ENST00000290776 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
CPNE2-201ENST00000290776 CCDC180Q9P1Z9 1646 aa35.8■■■■□ 3.32
CPNE2-201ENST00000290776 DCAF8L2P0C7V8 631 aa35.62■■■■□ 3.29
CPNE2-201ENST00000290776 MYO15BQ96JP2 1530 aa35.49■■■■□ 3.27
CPNE2-201ENST00000290776 CHIC1Q5VXU3 224 aa35.44■■■■□ 3.26
CPNE2-201ENST00000290776 HRCP23327 699 aa35.08■■■■□ 3.21
CPNE2-201ENST00000290776 PCGF6Q9BYE7 350 aa34.96■■■■□ 3.19
CPNE2-201ENST00000290776 DCAF1Q9Y4B6 1507 aa34.66■■■■□ 3.14
CPNE2-201ENST00000290776 LOC105371045A0A1W2PR82 267 aa34.6■■■■□ 3.13
CPNE2-201ENST00000290776 PPARGC1BQ86YN6 1023 aaKnown RBP34.53■■■■□ 3.12
CPNE2-201ENST00000290776 ABCC9O60706 1549 aa34.1■■■■□ 3.05
CPNE2-201ENST00000290776 TRIM26Q12899 539 aaPredicted RBP34■■■■□ 3.03
CPNE2-201ENST00000290776 SCRIBQ14160 1630 aa33.96■■■■□ 3.03
CPNE2-201ENST00000290776 RSF1Q96T23 1441 aaPredicted RBP33.88■■■■□ 3.01
CPNE2-201ENST00000290776 TRIM41Q8WV44 630 aa33.79■■■■□ 3
CPNE2-201ENST00000290776 FAM9AQ8IZU1 332 aaPredicted RBP33.75■■■□□ 2.99
CPNE2-201ENST00000290776 RB1CC1Q8TDY2 1594 aa33.69■■■□□ 2.98
CPNE2-201ENST00000290776 EHMT2Q96KQ7 1210 aa33.64■■■□□ 2.98
CPNE2-201ENST00000290776 ZEB1P37275 1124 aaPredicted RBP33.33■■■□□ 2.93
CPNE2-201ENST00000290776 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
CPNE2-201ENST00000290776 MROH2BQ7Z745 1585 aa33.18■■■□□ 2.9
CPNE2-201ENST00000290776 WIZO95785 1651 aa33.07■■■□□ 2.88
CPNE2-201ENST00000290776 NACADO15069 1562 aa33.04■■■□□ 2.88
CPNE2-201ENST00000290776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.76■■■□□ 2.84
CPNE2-201ENST00000290776 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
CPNE2-201ENST00000290776 SCAF1Q9H7N4 1312 aaKnown RBP32.69■■■□□ 2.82
CPNE2-201ENST00000290776 CCER1Q8TC90 406 aaPredicted RBP32.65■■■□□ 2.82
CPNE2-201ENST00000290776 TTBK1Q5TCY1 1321 aaPredicted RBP32.64■■■□□ 2.82
CPNE2-201ENST00000290776 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
CPNE2-201ENST00000290776 ABCC8Q09428 1581 aa32.56■■■□□ 2.8
CPNE2-201ENST00000290776 CCDC88BA6NC98 1476 aa32.47■■■□□ 2.79
CPNE2-201ENST00000290776 TOP2AP11388 1531 aaKnown RBP32.4■■■□□ 2.78
CPNE2-201ENST00000290776 CEP162Q5TB80 1403 aa32.32■■■□□ 2.76
CPNE2-201ENST00000290776 SMARCA4P51532 1647 aa32.31■■■□□ 2.76
CPNE2-201ENST00000290776 SOGA1O94964 1423 aa32.31■■■□□ 2.76
CPNE2-201ENST00000290776 SMARCA2P51531 1590 aa32.29■■■□□ 2.76
CPNE2-201ENST00000290776 PELP1Q8IZL8 1130 aaKnown RBP32.25■■■□□ 2.75
CPNE2-201ENST00000290776 WRNQ14191 1432 aaPredicted RBP eCLIP32.22■■■□□ 2.75
CPNE2-201ENST00000290776 DIEXFQ68CQ4 756 aaKnown RBP32.19■■■□□ 2.74
CPNE2-201ENST00000290776 UBTFP17480 764 aaKnown RBP32.19■■■□□ 2.74
CPNE2-201ENST00000290776 NEUROD1Q13562 356 aa32.16■■■□□ 2.74
CPNE2-201ENST00000290776 ACIN1Q9UKV3 1341 aaKnown RBP32.16■■■□□ 2.74
CPNE2-201ENST00000290776 RUSC2Q8N2Y8 1516 aa32.15■■■□□ 2.74
CPNE2-201ENST00000290776 TNIKQ9UKE5 1360 aa32.12■■■□□ 2.73
CPNE2-201ENST00000290776 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
CPNE2-201ENST00000290776 CSRNP3Q8WYN3 585 aa32.11■■■□□ 2.73
CPNE2-201ENST00000290776 EEA1Q15075 1411 aa31.96■■■□□ 2.71
CPNE2-201ENST00000290776 PABPN1Q86U42 306 aaKnown RBP eCLIP31.95■■■□□ 2.7
CPNE2-201ENST00000290776 CENPBP07199 599 aaPredicted RBP31.9■■■□□ 2.7
CPNE2-201ENST00000290776 GTF3C3Q9Y5Q9 886 aa31.9■■■□□ 2.7
CPNE2-201ENST00000290776 GOLGA3Q08378 1498 aa31.9■■■□□ 2.7
CPNE2-201ENST00000290776 HNRNPUL2Q1KMD3 747 aaKnown RBP31.79■■■□□ 2.68
CPNE2-201ENST00000290776 ZNF316A6NFI3 1004 aaPredicted RBP31.77■■■□□ 2.68
CPNE2-201ENST00000290776 SYNJ1O43426 1573 aa31.68■■■□□ 2.66
CPNE2-201ENST00000290776 RANGAP1P46060 587 aaPredicted RBP31.68■■■□□ 2.66
CPNE2-201ENST00000290776 YTHDC1Q96MU7 727 aaKnown RBP31.67■■■□□ 2.66
CPNE2-201ENST00000290776 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
CPNE2-201ENST00000290776 BICRAQ9NZM4 1560 aa31.63■■■□□ 2.65
CPNE2-201ENST00000290776 CLIP1P30622 1438 aa31.62■■■□□ 2.65
CPNE2-201ENST00000290776 KIF21BO75037 1637 aa31.56■■■□□ 2.64
CPNE2-201ENST00000290776 APLP2Q06481 763 aa31.51■■■□□ 2.63
CPNE2-201ENST00000290776 PEG3Q9GZU2 1588 aa31.51■■■□□ 2.63
CPNE2-201ENST00000290776 VPS8Q8N3P4 1428 aa31.48■■■□□ 2.63
CPNE2-201ENST00000290776 RAPGEF2Q9Y4G8 1499 aa31.48■■■□□ 2.63
CPNE2-201ENST00000290776 MIER1Q8N108 512 aa31.47■■■□□ 2.63
CPNE2-201ENST00000290776 ATAD2BQ9ULI0 1458 aa31.39■■■□□ 2.62
CPNE2-201ENST00000290776 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
CPNE2-201ENST00000290776 TOP2BQ02880 1626 aa31.15■■■□□ 2.58
CPNE2-201ENST00000290776 KANK4Q5T7N3 995 aaPredicted RBP31.06■■■□□ 2.56
CPNE2-201ENST00000290776 ARAP1Q96P48 1450 aa31.02■■■□□ 2.56
CPNE2-201ENST00000290776 DHX57Q6P158 1386 aaKnown RBP31.02■■■□□ 2.56
CPNE2-201ENST00000290776 BIVM-ERCC5R4GMW8 1640 aa30.99■■■□□ 2.55
CPNE2-201ENST00000290776 PRXQ9BXM0 1461 aa30.97■■■□□ 2.55
CPNE2-201ENST00000290776 ERICH3Q5RHP9 1530 aa30.95■■■□□ 2.54
CPNE2-201ENST00000290776 CLSPNQ9HAW4 1339 aa30.88■■■□□ 2.53
CPNE2-201ENST00000290776 ITGAEP38570 1179 aa30.87■■■□□ 2.53
CPNE2-201ENST00000290776 CUX1P39880 1505 aa30.84■■■□□ 2.53
CPNE2-201ENST00000290776 KIF27Q86VH2 1401 aa30.79■■■□□ 2.52
CPNE2-201ENST00000290776 RRBP1Q9P2E9 1410 aaKnown RBP30.76■■■□□ 2.51
CPNE2-201ENST00000290776 CCNB3Q8WWL7 1395 aa30.71■■■□□ 2.51
CPNE2-201ENST00000290776 ARHGAP35Q9NRY4 1499 aa30.69■■■□□ 2.5
CPNE2-201ENST00000290776 MYT1Q01538 1121 aa30.63■■■□□ 2.49
CPNE2-201ENST00000290776 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
CPNE2-201ENST00000290776 HMGXB3Q12766 1538 aa30.61■■■□□ 2.49
CPNE2-201ENST00000290776 SUPT16HQ9Y5B9 1047 aaKnown RBP30.58■■■□□ 2.49
CPNE2-201ENST00000290776 CUX2O14529 1486 aa30.56■■■□□ 2.48
CPNE2-201ENST00000290776 CFTRP13569 1480 aa30.54■■■□□ 2.48
CPNE2-201ENST00000290776 RAB3GAP2Q9H2M9 1393 aa30.53■■■□□ 2.48
CPNE2-201ENST00000290776 KCNH8Q96L42 1107 aa30.47■■■□□ 2.47
CPNE2-201ENST00000290776 IGF1RP08069 1367 aa30.42■■■□□ 2.46
CPNE2-201ENST00000290776 MAPKBP1O60336 1514 aa30.42■■■□□ 2.46
CPNE2-201ENST00000290776 TIAM1Q13009 1591 aa30.4■■■□□ 2.46
CPNE2-201ENST00000290776 FAM50AQ14320 339 aaKnown RBP30.4■■■□□ 2.46
CPNE2-201ENST00000290776 ATP1B4Q9UN42 357 aaPredicted RBP30.38■■■□□ 2.45
CPNE2-201ENST00000290776 P3H3Q8IVL6 736 aa30.37■■■□□ 2.45
CPNE2-201ENST00000290776 SIN3AQ96ST3 1273 aa30.34■■■□□ 2.45
CPNE2-201ENST00000290776 CARMIL1Q5VZK9 1371 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 300 ms