RNA–Protein interactions for RNA: ENST00000567491.1

SH3RF3-AS1-201, SH3RF3 antisense RNA 1, humanhuman

BASIC

Gene SH3RF3-AS1, Length 1,604 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-AS1-201ENST00000567491 NISCHQ9Y2I1 1504 aa52.58■■■■■ 6.01
SH3RF3-AS1-201ENST00000567491 CCDC180Q9P1Z9 1646 aa46.47■■■■■ 5.03
SH3RF3-AS1-201ENST00000567491 ABCC9O60706 1549 aa44.69■■■■■ 4.74
SH3RF3-AS1-201ENST00000567491 ZCCHC6Q5VYS8 1495 aaKnown RBP43.98■■■■■ 4.63
SH3RF3-AS1-201ENST00000567491 DCAF8L2P0C7V8 631 aa43.66■■■■■ 4.58
SH3RF3-AS1-201ENST00000567491 DCAF1Q9Y4B6 1507 aa43.5■■■■■ 4.55
SH3RF3-AS1-201ENST00000567491 NACADO15069 1562 aa43.43■■■■■ 4.54
SH3RF3-AS1-201ENST00000567491 MYO15BQ96JP2 1530 aa43.36■■■■■ 4.53
SH3RF3-AS1-201ENST00000567491 RB1CC1Q8TDY2 1594 aa43.32■■■■■ 4.53
SH3RF3-AS1-201ENST00000567491 SCRIBQ14160 1630 aa42.52■■■■■ 4.4
SH3RF3-AS1-201ENST00000567491 UNC13AQ9UPW8 1703 aa42.5■■■■■ 4.39
SH3RF3-AS1-201ENST00000567491 SHROOM4Q9ULL8 1493 aa42.12■■■■■ 4.33
SH3RF3-AS1-201ENST00000567491 BICRAQ9NZM4 1560 aa41.97■■■■■ 4.31
SH3RF3-AS1-201ENST00000567491 PABPN1Q86U42 306 aaKnown RBP eCLIP41.84■■■■■ 4.29
SH3RF3-AS1-201ENST00000567491 CECR2Q9BXF3 1484 aa40.88■■■■■ 4.14
SH3RF3-AS1-201ENST00000567491 EIF4G1Q04637 1599 aaKnown RBP40.82■■■■■ 4.12
SH3RF3-AS1-201ENST00000567491 BAZ1AQ9NRL2 1556 aaPredicted RBP40.73■■■■■ 4.11
SH3RF3-AS1-201ENST00000567491 SMARCA4P51532 1647 aa40.7■■■■■ 4.11
SH3RF3-AS1-201ENST00000567491 MROH2BQ7Z745 1585 aa40.57■■■■■ 4.08
SH3RF3-AS1-201ENST00000567491 CC2D2AQ9P2K1 1620 aa40.47■■■■■ 4.07
SH3RF3-AS1-201ENST00000567491 RSF1Q96T23 1441 aaPredicted RBP40.35■■■■■ 4.05
SH3RF3-AS1-201ENST00000567491 WIZO95785 1651 aa40.24■■■■■ 4.03
SH3RF3-AS1-201ENST00000567491 SMARCA2P51531 1590 aa40.23■■■■■ 4.03
SH3RF3-AS1-201ENST00000567491 PEG3Q9GZU2 1588 aa40.22■■■■■ 4.03
SH3RF3-AS1-201ENST00000567491 ATAD2BQ9ULI0 1458 aa40.19■■■■■ 4.02
SH3RF3-AS1-201ENST00000567491 DNAJC5BQ9UF47 199 aa40.17■■■■■ 4.02
SH3RF3-AS1-201ENST00000567491 NCAPD3P42695 1498 aa40■■■■□ 3.99
SH3RF3-AS1-201ENST00000567491 SUPT5HO00267 1087 aaKnown RBP40■■■■□ 3.99
SH3RF3-AS1-201ENST00000567491 BAZ1BQ9UIG0 1483 aaKnown RBP39.96■■■■□ 3.99
SH3RF3-AS1-201ENST00000567491 HMGXB3Q12766 1538 aa39.96■■■■□ 3.99
SH3RF3-AS1-201ENST00000567491 TOP2AP11388 1531 aaKnown RBP39.81■■■■□ 3.96
SH3RF3-AS1-201ENST00000567491 CCDC88BA6NC98 1476 aa39.3■■■■□ 3.88
SH3RF3-AS1-201ENST00000567491 LAMC3Q9Y6N6 1575 aa38.91■■■■□ 3.82
SH3RF3-AS1-201ENST00000567491 NESP48681 1621 aa38.9■■■■□ 3.82
SH3RF3-AS1-201ENST00000567491 CADPSQ9ULU8 1353 aa38.9■■■■□ 3.82
SH3RF3-AS1-201ENST00000567491 CFTRP13569 1480 aa38.85■■■■□ 3.81
SH3RF3-AS1-201ENST00000567491 PRDM2Q13029 1718 aa38.83■■■■□ 3.81
SH3RF3-AS1-201ENST00000567491 KIF21AQ7Z4S6 1674 aa38.57■■■■□ 3.76
SH3RF3-AS1-201ENST00000567491 PDS5BQ9NTI5 1447 aa38.57■■■■□ 3.76
SH3RF3-AS1-201ENST00000567491 FANCD2Q9BXW9 1451 aa38.51■■■■□ 3.76
SH3RF3-AS1-201ENST00000567491 ERCC6Q03468 1493 aa38.46■■■■□ 3.75
SH3RF3-AS1-201ENST00000567491 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
SH3RF3-AS1-201ENST00000567491 ABCC8Q09428 1581 aa38.21■■■■□ 3.71
SH3RF3-AS1-201ENST00000567491 THOC2Q8NI27 1593 aaKnown RBP38.17■■■■□ 3.7
SH3RF3-AS1-201ENST00000567491 MRC2Q9UBG0 1479 aa38.16■■■■□ 3.7
SH3RF3-AS1-201ENST00000567491 URB2Q14146 1524 aaKnown RBP38.09■■■■□ 3.69
SH3RF3-AS1-201ENST00000567491 WRNQ14191 1432 aaPredicted RBP eCLIP38.05■■■■□ 3.68
SH3RF3-AS1-201ENST00000567491 DNMBPQ6XZF7 1577 aa38.04■■■■□ 3.68
SH3RF3-AS1-201ENST00000567491 WDR62O43379 1518 aa38.02■■■■□ 3.68
SH3RF3-AS1-201ENST00000567491 CUX1P39880 1505 aa38.02■■■■□ 3.68
SH3RF3-AS1-201ENST00000567491 TOPBP1Q92547 1522 aa37.99■■■■□ 3.67
SH3RF3-AS1-201ENST00000567491 SYNJ1O43426 1573 aa37.98■■■■□ 3.67
SH3RF3-AS1-201ENST00000567491 BIVM-ERCC5R4GMW8 1640 aa37.93■■■■□ 3.66
SH3RF3-AS1-201ENST00000567491 TOP2BQ02880 1626 aa37.92■■■■□ 3.66
SH3RF3-AS1-201ENST00000567491 FGD5Q6ZNL6 1462 aa37.77■■■■□ 3.64
SH3RF3-AS1-201ENST00000567491 CHIC1Q5VXU3 224 aa37.73■■■■□ 3.63
SH3RF3-AS1-201ENST00000567491 POLA1P09884 1462 aaPredicted RBP37.72■■■■□ 3.63
SH3RF3-AS1-201ENST00000567491 TRIM41Q8WV44 630 aa37.7■■■■□ 3.63
SH3RF3-AS1-201ENST00000567491 CUX2O14529 1486 aa37.69■■■■□ 3.62
SH3RF3-AS1-201ENST00000567491 RAD54L2Q9Y4B4 1467 aa37.55■■■■□ 3.6
SH3RF3-AS1-201ENST00000567491 SOGA1O94964 1423 aa37.55■■■■□ 3.6
SH3RF3-AS1-201ENST00000567491 TARBP1Q13395 1621 aaKnown RBP37.53■■■■□ 3.6
SH3RF3-AS1-201ENST00000567491 IFT140Q96RY7 1462 aa37.53■■■■□ 3.6
SH3RF3-AS1-201ENST00000567491 WDR97A6NE52 1622 aa37.49■■■■□ 3.59
SH3RF3-AS1-201ENST00000567491 ABCA10Q8WWZ4 1543 aa37.4■■■■□ 3.58
SH3RF3-AS1-201ENST00000567491 ZNF608Q9ULD9 1512 aaPredicted RBP37.32■■■■□ 3.56
SH3RF3-AS1-201ENST00000567491 EIF4G3O43432 1585 aaKnown RBP37.28■■■■□ 3.56
SH3RF3-AS1-201ENST00000567491 ABCA5Q8WWZ7 1642 aa37.25■■■■□ 3.55
SH3RF3-AS1-201ENST00000567491 TDRD9Q8NDG6 1382 aaKnown RBP37.25■■■■□ 3.55
SH3RF3-AS1-201ENST00000567491 AQRO60306 1485 aaKnown RBP eCLIP37.2■■■■□ 3.55
SH3RF3-AS1-201ENST00000567491 KIF27Q86VH2 1401 aa37.19■■■■□ 3.54
SH3RF3-AS1-201ENST00000567491 PBRM1Q86U86 1689 aa37.17■■■■□ 3.54
SH3RF3-AS1-201ENST00000567491 GAPVD1Q14C86 1478 aa37.16■■■■□ 3.54
SH3RF3-AS1-201ENST00000567491 RUSC2Q8N2Y8 1516 aa37.12■■■■□ 3.53
SH3RF3-AS1-201ENST00000567491 GRIN2BQ13224 1484 aa37.03■■■■□ 3.52
SH3RF3-AS1-201ENST00000567491 EEA1Q15075 1411 aa36.99■■■■□ 3.51
SH3RF3-AS1-201ENST00000567491 ERICH3Q5RHP9 1530 aa36.98■■■■□ 3.51
SH3RF3-AS1-201ENST00000567491 FAM9AQ8IZU1 332 aaPredicted RBP36.96■■■■□ 3.51
SH3RF3-AS1-201ENST00000567491 SNAPC4Q5SXM2 1469 aa36.92■■■■□ 3.5
SH3RF3-AS1-201ENST00000567491 CUL7Q14999 1698 aa36.87■■■■□ 3.49
SH3RF3-AS1-201ENST00000567491 IGF1RP08069 1367 aa36.87■■■■□ 3.49
SH3RF3-AS1-201ENST00000567491 MAGI1Q96QZ7 1491 aaPredicted RBP36.85■■■■□ 3.49
SH3RF3-AS1-201ENST00000567491 ADAMTS12P58397 1594 aa36.84■■■■□ 3.49
SH3RF3-AS1-201ENST00000567491 CSRNP3Q8WYN3 585 aa36.8■■■■□ 3.48
SH3RF3-AS1-201ENST00000567491 FHAD1B1AJZ9 1412 aa36.73■■■■□ 3.47
SH3RF3-AS1-201ENST00000567491 CARMIL1Q5VZK9 1371 aa36.72■■■■□ 3.47
SH3RF3-AS1-201ENST00000567491 CHD1O14646 1710 aa36.72■■■■□ 3.47
SH3RF3-AS1-201ENST00000567491 SYNJ2O15056 1496 aa36.7■■■■□ 3.47
SH3RF3-AS1-201ENST00000567491 PRXQ9BXM0 1461 aa36.64■■■■□ 3.46
SH3RF3-AS1-201ENST00000567491 FBLN2P98095 1184 aa36.63■■■■□ 3.45
SH3RF3-AS1-201ENST00000567491 KIF21BO75037 1637 aa36.62■■■■□ 3.45
SH3RF3-AS1-201ENST00000567491 RAPGEF2Q9Y4G8 1499 aa36.61■■■■□ 3.45
SH3RF3-AS1-201ENST00000567491 CHMP7Q8WUX9 453 aaPredicted RBP36.61■■■■□ 3.45
SH3RF3-AS1-201ENST00000567491 GRIN2AQ12879 1464 aa36.58■■■■□ 3.45
SH3RF3-AS1-201ENST00000567491 EHMT2Q96KQ7 1210 aa36.48■■■■□ 3.43
SH3RF3-AS1-201ENST00000567491 GOLGA3Q08378 1498 aa36.45■■■■□ 3.43
SH3RF3-AS1-201ENST00000567491 CEP170Q5SW79 1584 aa36.39■■■■□ 3.42
SH3RF3-AS1-201ENST00000567491 CTTNBP2Q8WZ74 1663 aa36.37■■■■□ 3.41
SH3RF3-AS1-201ENST00000567491 NUP160Q12769 1436 aa36.34■■■■□ 3.41
SH3RF3-AS1-201ENST00000567491 UBTFP17480 764 aaKnown RBP36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms