RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 NISCHQ9Y2I1 1504 aa54.63■■■■■ 6.34
SDHAP1-204ENST00000427415 CCDC180Q9P1Z9 1646 aa48.6■■■■■ 5.37
SDHAP1-204ENST00000427415 ABCC9O60706 1549 aa47.24■■■■■ 5.15
SDHAP1-204ENST00000427415 RB1CC1Q8TDY2 1594 aa45.62■■■■■ 4.89
SDHAP1-204ENST00000427415 NACADO15069 1562 aa45.59■■■■■ 4.89
SDHAP1-204ENST00000427415 ZCCHC6Q5VYS8 1495 aaKnown RBP45.56■■■■■ 4.88
SDHAP1-204ENST00000427415 DCAF8L2P0C7V8 631 aa45.47■■■■■ 4.87
SDHAP1-204ENST00000427415 MYO15BQ96JP2 1530 aa45.38■■■■■ 4.86
SDHAP1-204ENST00000427415 DCAF1Q9Y4B6 1507 aa45.26■■■■■ 4.84
SDHAP1-204ENST00000427415 UNC13AQ9UPW8 1703 aa44.62■■■■■ 4.73
SDHAP1-204ENST00000427415 SCRIBQ14160 1630 aa44.29■■■■■ 4.68
SDHAP1-204ENST00000427415 BICRAQ9NZM4 1560 aa44.16■■■■■ 4.66
SDHAP1-204ENST00000427415 PABPN1Q86U42 306 aaKnown RBP eCLIP44.1■■■■■ 4.65
SDHAP1-204ENST00000427415 SHROOM4Q9ULL8 1493 aa43.81■■■■■ 4.6
SDHAP1-204ENST00000427415 DNAJC5BQ9UF47 199 aa43.05■■■■■ 4.48
SDHAP1-204ENST00000427415 EIF4G1Q04637 1599 aaKnown RBP43.01■■■■■ 4.48
SDHAP1-204ENST00000427415 CC2D2AQ9P2K1 1620 aa42.79■■■■■ 4.44
SDHAP1-204ENST00000427415 CECR2Q9BXF3 1484 aa42.48■■■■■ 4.39
SDHAP1-204ENST00000427415 SMARCA4P51532 1647 aa42.39■■■■■ 4.38
SDHAP1-204ENST00000427415 BAZ1AQ9NRL2 1556 aaPredicted RBP42.38■■■■■ 4.37
SDHAP1-204ENST00000427415 SMARCA2P51531 1590 aa42.09■■■■■ 4.33
SDHAP1-204ENST00000427415 MROH2BQ7Z745 1585 aa42.08■■■■■ 4.33
SDHAP1-204ENST00000427415 ATAD2BQ9ULI0 1458 aa42.05■■■■■ 4.32
SDHAP1-204ENST00000427415 NCAPD3P42695 1498 aa42■■■■■ 4.31
SDHAP1-204ENST00000427415 PEG3Q9GZU2 1588 aa41.97■■■■■ 4.31
SDHAP1-204ENST00000427415 HMGXB3Q12766 1538 aa41.89■■■■■ 4.3
SDHAP1-204ENST00000427415 BAZ1BQ9UIG0 1483 aaKnown RBP41.77■■■■■ 4.28
SDHAP1-204ENST00000427415 WIZO95785 1651 aa41.68■■■■■ 4.26
SDHAP1-204ENST00000427415 RSF1Q96T23 1441 aaPredicted RBP41.65■■■■■ 4.26
SDHAP1-204ENST00000427415 TOP2AP11388 1531 aaKnown RBP41.28■■■■■ 4.2
SDHAP1-204ENST00000427415 LAMC3Q9Y6N6 1575 aa40.95■■■■■ 4.15
SDHAP1-204ENST00000427415 NESP48681 1621 aa40.92■■■■■ 4.14
SDHAP1-204ENST00000427415 CADPSQ9ULU8 1353 aa40.78■■■■■ 4.12
SDHAP1-204ENST00000427415 ERCC6Q03468 1493 aa40.77■■■■■ 4.12
SDHAP1-204ENST00000427415 CCDC88BA6NC98 1476 aa40.71■■■■■ 4.11
SDHAP1-204ENST00000427415 SUPT5HO00267 1087 aaKnown RBP40.71■■■■■ 4.11
SDHAP1-204ENST00000427415 PDS5BQ9NTI5 1447 aa40.62■■■■■ 4.09
SDHAP1-204ENST00000427415 CFTRP13569 1480 aa40.59■■■■■ 4.09
SDHAP1-204ENST00000427415 KIF21AQ7Z4S6 1674 aa40.55■■■■■ 4.08
SDHAP1-204ENST00000427415 PRDM2Q13029 1718 aa40.48■■■■■ 4.07
SDHAP1-204ENST00000427415 FANCD2Q9BXW9 1451 aa40.35■■■■■ 4.05
SDHAP1-204ENST00000427415 THOC2Q8NI27 1593 aaKnown RBP40.34■■■■■ 4.05
SDHAP1-204ENST00000427415 CEP164Q9UPV0 1460 aa40.31■■■■■ 4.04
SDHAP1-204ENST00000427415 CUX2O14529 1486 aa40.26■■■■■ 4.04
SDHAP1-204ENST00000427415 MRC2Q9UBG0 1479 aa40.2■■■■■ 4.03
SDHAP1-204ENST00000427415 WDR62O43379 1518 aa40.06■■■■■ 4
SDHAP1-204ENST00000427415 URB2Q14146 1524 aaKnown RBP39.91■■■■□ 3.98
SDHAP1-204ENST00000427415 ABCC8Q09428 1581 aa39.77■■■■□ 3.96
SDHAP1-204ENST00000427415 DNMBPQ6XZF7 1577 aa39.74■■■■□ 3.95
SDHAP1-204ENST00000427415 TOPBP1Q92547 1522 aa39.72■■■■□ 3.95
SDHAP1-204ENST00000427415 CUX1P39880 1505 aa39.48■■■■□ 3.91
SDHAP1-204ENST00000427415 IFT140Q96RY7 1462 aa39.45■■■■□ 3.91
SDHAP1-204ENST00000427415 POLA1P09884 1462 aaPredicted RBP39.39■■■■□ 3.9
SDHAP1-204ENST00000427415 FGD5Q6ZNL6 1462 aa39.33■■■■□ 3.89
SDHAP1-204ENST00000427415 WRNQ14191 1432 aaPredicted RBP eCLIP39.31■■■■□ 3.88
SDHAP1-204ENST00000427415 TARBP1Q13395 1621 aaKnown RBP39.29■■■■□ 3.88
SDHAP1-204ENST00000427415 BIVM-ERCC5R4GMW8 1640 aa39.26■■■■□ 3.88
SDHAP1-204ENST00000427415 TOP2BQ02880 1626 aa39.25■■■■□ 3.87
SDHAP1-204ENST00000427415 SOGA1O94964 1423 aa39.21■■■■□ 3.87
SDHAP1-204ENST00000427415 SYNJ1O43426 1573 aa39.21■■■■□ 3.87
SDHAP1-204ENST00000427415 ZNF608Q9ULD9 1512 aaPredicted RBP39.19■■■■□ 3.86
SDHAP1-204ENST00000427415 RAD54L2Q9Y4B4 1467 aa39.17■■■■□ 3.86
SDHAP1-204ENST00000427415 EIF4G3O43432 1585 aaKnown RBP39.14■■■■□ 3.86
SDHAP1-204ENST00000427415 WDR97A6NE52 1622 aa39.07■■■■□ 3.85
SDHAP1-204ENST00000427415 AQRO60306 1485 aaKnown RBP eCLIP38.98■■■■□ 3.834e-6■■■□□ 14.6
SDHAP1-204ENST00000427415 ABCA10Q8WWZ4 1543 aa38.97■■■■□ 3.83
SDHAP1-204ENST00000427415 TDRD9Q8NDG6 1382 aaKnown RBP38.94■■■■□ 3.82
SDHAP1-204ENST00000427415 ABCA5Q8WWZ7 1642 aa38.83■■■■□ 3.81
SDHAP1-204ENST00000427415 PBRM1Q86U86 1689 aa38.8■■■■□ 3.8
SDHAP1-204ENST00000427415 GAPVD1Q14C86 1478 aa38.79■■■■□ 3.8
SDHAP1-204ENST00000427415 GRIN2BQ13224 1484 aa38.78■■■■□ 3.8
SDHAP1-204ENST00000427415 DNAJC5Q9H3Z4 198 aa38.7■■■■□ 3.79
SDHAP1-204ENST00000427415 SNAPC4Q5SXM2 1469 aa38.69■■■■□ 3.78
SDHAP1-204ENST00000427415 MAGI1Q96QZ7 1491 aaPredicted RBP38.67■■■■□ 3.78
SDHAP1-204ENST00000427415 CHD1O14646 1710 aa38.64■■■■□ 3.78
SDHAP1-204ENST00000427415 OSCARQ8IYS5 282 aa38.55■■■■□ 3.76
SDHAP1-204ENST00000427415 ERICH3Q5RHP9 1530 aa38.53■■■■□ 3.76
SDHAP1-204ENST00000427415 SYNJ2O15056 1496 aa38.5■■■■□ 3.75
SDHAP1-204ENST00000427415 KIF27Q86VH2 1401 aa38.48■■■■□ 3.75
SDHAP1-204ENST00000427415 FBLN2P98095 1184 aa38.48■■■■□ 3.75
SDHAP1-204ENST00000427415 ADAMTS12P58397 1594 aa38.46■■■■□ 3.75
SDHAP1-204ENST00000427415 TRIM41Q8WV44 630 aa38.46■■■■□ 3.75
SDHAP1-204ENST00000427415 CHMP7Q8WUX9 453 aaPredicted RBP38.42■■■■□ 3.74
SDHAP1-204ENST00000427415 FHAD1B1AJZ9 1412 aa38.36■■■■□ 3.73
SDHAP1-204ENST00000427415 GRIN2AQ12879 1464 aa38.28■■■■□ 3.72
SDHAP1-204ENST00000427415 CUL7Q14999 1698 aa38.27■■■■□ 3.72
SDHAP1-204ENST00000427415 IGF1RP08069 1367 aa38.23■■■■□ 3.71
SDHAP1-204ENST00000427415 CLASP1Q7Z460 1538 aa38.17■■■■□ 3.7
SDHAP1-204ENST00000427415 RUSC2Q8N2Y8 1516 aa38.11■■■■□ 3.69
SDHAP1-204ENST00000427415 NUP160Q12769 1436 aa38.08■■■■□ 3.69
SDHAP1-204ENST00000427415 CEP170Q5SW79 1584 aa38.08■■■■□ 3.69
SDHAP1-204ENST00000427415 CHIC1Q5VXU3 224 aa38.08■■■■□ 3.69
SDHAP1-204ENST00000427415 CARMIL1Q5VZK9 1371 aa38.04■■■■□ 3.68
SDHAP1-204ENST00000427415 RIMBP3CA6NJZ7 1639 aa37.99■■■■□ 3.67
SDHAP1-204ENST00000427415 RIMBP3BA6NNM3 1639 aa37.99■■■■□ 3.67
SDHAP1-204ENST00000427415 RIMBP3Q9UFD9 1639 aa37.99■■■■□ 3.67
SDHAP1-204ENST00000427415 ARHGEF11O15085 1522 aa37.98■■■■□ 3.67
SDHAP1-204ENST00000427415 EEA1Q15075 1411 aa37.9■■■■□ 3.66
SDHAP1-204ENST00000427415 RAPGEF2Q9Y4G8 1499 aa37.88■■■■□ 3.65
SDHAP1-204ENST00000427415 SHROOM2Q13796 1616 aa37.82■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms