RNA–Protein interactions for RNA: ENST00000407673.5

CACNA1I-204, Transcript of calcium voltage-gated channel subunit alpha1 I, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1I, Length 5,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1I-204ENST00000407673 DCAF8L2P0C7V8 631 aa33.03■■■□□ 2.88
CACNA1I-204ENST00000407673 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
CACNA1I-204ENST00000407673 EHMT2Q96KQ7 1210 aa31.14■■■□□ 2.58
CACNA1I-204ENST00000407673 PELP1Q8IZL8 1130 aaKnown RBP31.04■■■□□ 2.56
CACNA1I-204ENST00000407673 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
CACNA1I-204ENST00000407673 APLP2Q06481 763 aa30.25■■■□□ 2.43
CACNA1I-204ENST00000407673 TTBK1Q5TCY1 1321 aaPredicted RBP30.15■■■□□ 2.42
CACNA1I-204ENST00000407673 ERICH6Q7L0X2 663 aa30.04■■■□□ 2.4
CACNA1I-204ENST00000407673 FAM9AQ8IZU1 332 aaPredicted RBP29.96■■■□□ 2.39
CACNA1I-204ENST00000407673 PCGF6Q9BYE7 350 aa29.96■■■□□ 2.39
CACNA1I-204ENST00000407673 NISCHQ9Y2I1 1504 aa29.87■■■□□ 2.37
CACNA1I-204ENST00000407673 CENPBP07199 599 aaPredicted RBP29.75■■■□□ 2.35
CACNA1I-204ENST00000407673 CCER1Q8TC90 406 aaPredicted RBP29.65■■■□□ 2.34
CACNA1I-204ENST00000407673 RANGAP1P46060 587 aaPredicted RBP29.57■■■□□ 2.32
CACNA1I-204ENST00000407673 ZEB1P37275 1124 aaPredicted RBP29.36■■■□□ 2.29
CACNA1I-204ENST00000407673 YTHDC1Q96MU7 727 aaKnown RBP29.34■■■□□ 2.29
CACNA1I-204ENST00000407673 ATP1B4Q9UN42 357 aaPredicted RBP29.25■■■□□ 2.27
CACNA1I-204ENST00000407673 NEFLP07196 543 aa29.19■■■□□ 2.26
CACNA1I-204ENST00000407673 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
CACNA1I-204ENST00000407673 MYT1Q01538 1121 aa29.01■■■□□ 2.23
CACNA1I-204ENST00000407673 UBTFP17480 764 aaKnown RBP28.88■■■□□ 2.21
CACNA1I-204ENST00000407673 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
CACNA1I-204ENST00000407673 DAXXQ9UER7 740 aaPredicted RBP28.54■■■□□ 2.16
CACNA1I-204ENST00000407673 POLR3GLQ9BT43 218 aa28.42■■■□□ 2.14
CACNA1I-204ENST00000407673 TRIM26Q12899 539 aaPredicted RBP28.34■■■□□ 2.13
CACNA1I-204ENST00000407673 ITGAEP38570 1179 aa28.3■■■□□ 2.12
CACNA1I-204ENST00000407673 HRCP23327 699 aa28.29■■■□□ 2.12
CACNA1I-204ENST00000407673 CNGB1Q14028 1251 aaPredicted RBP28.27■■■□□ 2.12
CACNA1I-204ENST00000407673 MYT1LQ9UL68 1186 aa28.09■■■□□ 2.09
CACNA1I-204ENST00000407673 HNRNPUL2Q1KMD3 747 aaKnown RBP28.02■■■□□ 2.08
CACNA1I-204ENST00000407673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28■■■□□ 2.07
CACNA1I-204ENST00000407673 RTL5Q5HYW3 569 aaPredicted RBP27.92■■■□□ 2.06
CACNA1I-204ENST00000407673 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
CACNA1I-204ENST00000407673 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
CACNA1I-204ENST00000407673 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
CACNA1I-204ENST00000407673 SLC4A1APQ9BWU0 796 aaKnown RBP27.82■■■□□ 2.04
CACNA1I-204ENST00000407673 CLSPNQ9HAW4 1339 aa27.81■■■□□ 2.04
CACNA1I-204ENST00000407673 DIEXFQ68CQ4 756 aaKnown RBP27.71■■■□□ 2.03
CACNA1I-204ENST00000407673 BCANQ96GW7 911 aa27.61■■■□□ 2.01
CACNA1I-204ENST00000407673 GTF3C3Q9Y5Q9 886 aa27.4■■□□□ 1.98
CACNA1I-204ENST00000407673 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
CACNA1I-204ENST00000407673 NEUROD1Q13562 356 aa27.35■■□□□ 1.97
CACNA1I-204ENST00000407673 TRIM52Q96A61 297 aa27.31■■□□□ 1.96
CACNA1I-204ENST00000407673 CDK11AQ9UQ88 783 aaPredicted RBP27.25■■□□□ 1.95
CACNA1I-204ENST00000407673 BCL11AQ9H165 835 aa27.16■■□□□ 1.94
CACNA1I-204ENST00000407673 ZNF326Q5BKZ1 582 aaKnown RBP27.15■■□□□ 1.94
CACNA1I-204ENST00000407673 ANP32CO43423 234 aa27.14■■□□□ 1.94
CACNA1I-204ENST00000407673 ZBTB47Q9UFB7 747 aaPredicted RBP27.09■■□□□ 1.93
CACNA1I-204ENST00000407673 CANXP27824 592 aaKnown RBP27■■□□□ 1.91
CACNA1I-204ENST00000407673 SLC24A1O60721 1099 aa26.95■■□□□ 1.9
CACNA1I-204ENST00000407673 NPM2Q86SE8 214 aaKnown RBP26.88■■□□□ 1.89
CACNA1I-204ENST00000407673 ANP32AP39687 249 aaKnown RBP26.83■■□□□ 1.89
CACNA1I-204ENST00000407673 ACIN1Q9UKV3 1341 aaKnown RBP26.79■■□□□ 1.88
CACNA1I-204ENST00000407673 EIF5BO60841 1220 aaKnown RBP26.75■■□□□ 1.87
CACNA1I-204ENST00000407673 NEFMP07197 916 aa26.62■■□□□ 1.85
CACNA1I-204ENST00000407673 FKBP8Q14318 412 aa26.56■■□□□ 1.84
CACNA1I-204ENST00000407673 ARID3CA6NKF2 412 aa26.54■■□□□ 1.84
CACNA1I-204ENST00000407673 ANP32BQ92688 251 aaKnown RBP26.5■■□□□ 1.83
CACNA1I-204ENST00000407673 FBLN2P98095 1184 aa26.5■■□□□ 1.83
CACNA1I-204ENST00000407673 P3H3Q8IVL6 736 aa26.47■■□□□ 1.83
CACNA1I-204ENST00000407673 HSP90AA1P07900 732 aaKnown RBP26.46■■□□□ 1.83
CACNA1I-204ENST00000407673 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
CACNA1I-204ENST00000407673 NBR1Q14596 966 aa26.37■■□□□ 1.81
CACNA1I-204ENST00000407673 ZNF777Q9ULD5 760 aaPredicted RBP26.36■■□□□ 1.81
CACNA1I-204ENST00000407673 ARXQ96QS3 562 aa26.33■■□□□ 1.81
CACNA1I-204ENST00000407673 HNRNPUQ00839 825 aaKnown RBP eCLIP26.33■■□□□ 1.8
CACNA1I-204ENST00000407673 FAM9BQ8IZU0 186 aa26.31■■□□□ 1.8
CACNA1I-204ENST00000407673 SALL2Q9Y467 1007 aaPredicted RBP26.3■■□□□ 1.8
CACNA1I-204ENST00000407673 UPF2Q9HAU5 1272 aaKnown RBP26.29■■□□□ 1.8
CACNA1I-204ENST00000407673 GLIPR1L2Q4G1C9 344 aa26.23■■□□□ 1.79
CACNA1I-204ENST00000407673 DDX10Q13206 875 aaKnown RBP26.2■■□□□ 1.78
CACNA1I-204ENST00000407673 TONSLQ96HA7 1378 aa26.16■■□□□ 1.78
CACNA1I-204ENST00000407673 CCDC136Q96JN2 1154 aa26.13■■□□□ 1.77
CACNA1I-204ENST00000407673 CHGAP10645 457 aaKnown RBP26.12■■□□□ 1.77
CACNA1I-204ENST00000407673 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
CACNA1I-204ENST00000407673 ABCC9O60706 1549 aa26.06■■□□□ 1.76
CACNA1I-204ENST00000407673 IRX6P78412 446 aaPredicted RBP26.05■■□□□ 1.76
CACNA1I-204ENST00000407673 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
CACNA1I-204ENST00000407673 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.98■■□□□ 1.75
CACNA1I-204ENST00000407673 TMC1Q8TDI8 760 aa25.98■■□□□ 1.75
CACNA1I-204ENST00000407673 STAG3Q9UJ98 1225 aa25.97■■□□□ 1.75
CACNA1I-204ENST00000407673 ESF1Q9H501 851 aaKnown RBP25.91■■□□□ 1.74
CACNA1I-204ENST00000407673 WDR43Q15061 677 aaKnown RBP eCLIP25.9■■□□□ 1.74
CACNA1I-204ENST00000407673 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.74
CACNA1I-204ENST00000407673 MRS2Q9HD23 443 aa25.88■■□□□ 1.73
CACNA1I-204ENST00000407673 CHIC2Q9UKJ5 165 aa25.86■■□□□ 1.73
CACNA1I-204ENST00000407673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.82■■□□□ 1.72
CACNA1I-204ENST00000407673 HIRIP3Q9BW71 556 aaPredicted RBP25.81■■□□□ 1.72
CACNA1I-204ENST00000407673 MIER1Q8N108 512 aa25.8■■□□□ 1.72
CACNA1I-204ENST00000407673 KDM2AQ9Y2K7 1162 aa25.78■■□□□ 1.72
CACNA1I-204ENST00000407673 MYH16Q9H6N6 1097 aa25.72■■□□□ 1.71
CACNA1I-204ENST00000407673 TRIM44Q96DX7 344 aaPredicted RBP25.68■■□□□ 1.7
CACNA1I-204ENST00000407673 CDK11BP21127 795 aaKnown RBP25.66■■□□□ 1.7
CACNA1I-204ENST00000407673 DDRGK1Q96HY6 314 aa25.65■■□□□ 1.7
CACNA1I-204ENST00000407673 SENP3-EIF4A1A0A087X0R7 540 aa25.63■■□□□ 1.69
CACNA1I-204ENST00000407673 BECN1Q14457 450 aa25.63■■□□□ 1.69
CACNA1I-204ENST00000407673 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
CACNA1I-204ENST00000407673 SENP3Q9H4L4 574 aaPredicted RBP25.61■■□□□ 1.69
CACNA1I-204ENST00000407673 NCLP19338 710 aaKnown RBP25.6■■□□□ 1.69
CACNA1I-204ENST00000407673 TPRNQ4KMQ1 711 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms