RNA–Protein interactions for RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 NISCHQ9Y2I1 1504 aa48.37■■■■■ 5.33
RDX-204ENST00000528498 CCDC180Q9P1Z9 1646 aa41.78■■■■■ 4.28
RDX-204ENST00000528498 ZCCHC6Q5VYS8 1495 aaKnown RBP40.69■■■■■ 4.1
RDX-204ENST00000528498 DCAF8L2P0C7V8 631 aa40.24■■■■■ 4.03
RDX-204ENST00000528498 SHROOM4Q9ULL8 1493 aa40.17■■■■■ 4.02
RDX-204ENST00000528498 DCAF1Q9Y4B6 1507 aa39.76■■■■□ 3.95
RDX-204ENST00000528498 ABCC9O60706 1549 aa39.61■■■■□ 3.93
RDX-204ENST00000528498 MYO15BQ96JP2 1530 aa39.08■■■■□ 3.85
RDX-204ENST00000528498 NACADO15069 1562 aa38.87■■■■□ 3.81
RDX-204ENST00000528498 SCRIBQ14160 1630 aa38.84■■■■□ 3.81
RDX-204ENST00000528498 SUPT5HO00267 1087 aaKnown RBP38.79■■■■□ 3.8
RDX-204ENST00000528498 RB1CC1Q8TDY2 1594 aa38.49■■■■□ 3.75
RDX-204ENST00000528498 UNC13AQ9UPW8 1703 aa37.94■■■■□ 3.66
RDX-204ENST00000528498 CECR2Q9BXF3 1484 aa37.78■■■■□ 3.64
RDX-204ENST00000528498 RSF1Q96T23 1441 aaPredicted RBP37.77■■■■□ 3.64
RDX-204ENST00000528498 PABPN1Q86U42 306 aaKnown RBP eCLIP37.56■■■■□ 3.6
RDX-204ENST00000528498 MROH2BQ7Z745 1585 aa37.53■■■■□ 3.6
RDX-204ENST00000528498 BICRAQ9NZM4 1560 aa37.51■■■■□ 3.6
RDX-204ENST00000528498 WIZO95785 1651 aa37.27■■■■□ 3.56
RDX-204ENST00000528498 BAZ1AQ9NRL2 1556 aaPredicted RBP37.24■■■■□ 3.55
RDX-204ENST00000528498 CHIC1Q5VXU3 224 aa37.19■■■■□ 3.54
RDX-204ENST00000528498 SMARCA4P51532 1647 aa37.11■■■■□ 3.53
RDX-204ENST00000528498 TOP2AP11388 1531 aaKnown RBP36.68■■■■□ 3.46
RDX-204ENST00000528498 PEG3Q9GZU2 1588 aa36.5■■■■□ 3.43
RDX-204ENST00000528498 CCDC88BA6NC98 1476 aa36.46■■■■□ 3.43
RDX-204ENST00000528498 SMARCA2P51531 1590 aa36.45■■■■□ 3.43
RDX-204ENST00000528498 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
RDX-204ENST00000528498 EIF4G1Q04637 1599 aaKnown RBP36.31■■■■□ 3.4
RDX-204ENST00000528498 TRIM41Q8WV44 630 aa36.26■■■■□ 3.39
RDX-204ENST00000528498 BAZ1BQ9UIG0 1483 aaKnown RBP36.24■■■■□ 3.39
RDX-204ENST00000528498 LOC105371045A0A1W2PR82 267 aa35.99■■■■□ 3.35
RDX-204ENST00000528498 NCAPD3P42695 1498 aa35.96■■■■□ 3.35
RDX-204ENST00000528498 ABCC8Q09428 1581 aa35.96■■■■□ 3.35
RDX-204ENST00000528498 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
RDX-204ENST00000528498 FAM9AQ8IZU1 332 aaPredicted RBP35.87■■■■□ 3.33
RDX-204ENST00000528498 CC2D2AQ9P2K1 1620 aa35.72■■■■□ 3.31
RDX-204ENST00000528498 EHMT2Q96KQ7 1210 aa35.55■■■■□ 3.28
RDX-204ENST00000528498 WRNQ14191 1432 aaPredicted RBP eCLIP35.5■■■■□ 3.27
RDX-204ENST00000528498 SYNJ1O43426 1573 aa35.42■■■■□ 3.26
RDX-204ENST00000528498 SOGA1O94964 1423 aa35.35■■■■□ 3.25
RDX-204ENST00000528498 CFTRP13569 1480 aa35.31■■■■□ 3.24
RDX-204ENST00000528498 RUSC2Q8N2Y8 1516 aa35.27■■■■□ 3.24
RDX-204ENST00000528498 CADPSQ9ULU8 1353 aa35.14■■■■□ 3.22
RDX-204ENST00000528498 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
RDX-204ENST00000528498 TOP2BQ02880 1626 aa35.09■■■■□ 3.21
RDX-204ENST00000528498 PRDM2Q13029 1718 aa35.03■■■■□ 3.2
RDX-204ENST00000528498 CUX1P39880 1505 aa35.02■■■■□ 3.2
RDX-204ENST00000528498 BIVM-ERCC5R4GMW8 1640 aa35.01■■■■□ 3.2
RDX-204ENST00000528498 CSRNP3Q8WYN3 585 aa35■■■■□ 3.19
RDX-204ENST00000528498 EEA1Q15075 1411 aa34.96■■■■□ 3.19
RDX-204ENST00000528498 NESP48681 1621 aa34.94■■■■□ 3.18
RDX-204ENST00000528498 FANCD2Q9BXW9 1451 aa34.79■■■■□ 3.16
RDX-204ENST00000528498 UBTFP17480 764 aaKnown RBP34.7■■■■□ 3.15
RDX-204ENST00000528498 PCGF6Q9BYE7 350 aa34.69■■■■□ 3.14
RDX-204ENST00000528498 GOLGA3Q08378 1498 aa34.67■■■■□ 3.14
RDX-204ENST00000528498 TNIKQ9UKE5 1360 aa34.63■■■■□ 3.13
RDX-204ENST00000528498 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
RDX-204ENST00000528498 CEP164Q9UPV0 1460 aa34.6■■■■□ 3.13
RDX-204ENST00000528498 KIF21BO75037 1637 aa34.6■■■■□ 3.13
RDX-204ENST00000528498 CEP162Q5TB80 1403 aa34.59■■■■□ 3.13
RDX-204ENST00000528498 FGD5Q6ZNL6 1462 aa34.57■■■■□ 3.13
RDX-204ENST00000528498 RAPGEF2Q9Y4G8 1499 aa34.56■■■■□ 3.12
RDX-204ENST00000528498 KIF27Q86VH2 1401 aa34.5■■■■□ 3.11
RDX-204ENST00000528498 TOPBP1Q92547 1522 aa34.45■■■■□ 3.11
RDX-204ENST00000528498 DNMBPQ6XZF7 1577 aa34.45■■■■□ 3.11
RDX-204ENST00000528498 CUX2O14529 1486 aa34.44■■■■□ 3.1
RDX-204ENST00000528498 PPARGC1BQ86YN6 1023 aaKnown RBP34.41■■■■□ 3.1
RDX-204ENST00000528498 PRXQ9BXM0 1461 aa34.39■■■■□ 3.1
RDX-204ENST00000528498 PDS5BQ9NTI5 1447 aa34.39■■■■□ 3.1
RDX-204ENST00000528498 URB2Q14146 1524 aaKnown RBP34.39■■■■□ 3.1
RDX-204ENST00000528498 KIF21AQ7Z4S6 1674 aa34.39■■■■□ 3.1
RDX-204ENST00000528498 RAD54L2Q9Y4B4 1467 aa34.36■■■■□ 3.09
RDX-204ENST00000528498 POLA1P09884 1462 aaPredicted RBP34.35■■■■□ 3.09
RDX-204ENST00000528498 TRIM26Q12899 539 aaPredicted RBP34.34■■■■□ 3.09
RDX-204ENST00000528498 RANGAP1P46060 587 aaPredicted RBP34.3■■■■□ 3.08
RDX-204ENST00000528498 IGF1RP08069 1367 aa34.26■■■■□ 3.08
RDX-204ENST00000528498 ERICH3Q5RHP9 1530 aa34.26■■■■□ 3.07
RDX-204ENST00000528498 CLIP1P30622 1438 aa34.21■■■■□ 3.07
RDX-204ENST00000528498 ABCA10Q8WWZ4 1543 aa34.16■■■■□ 3.06
RDX-204ENST00000528498 TTBK1Q5TCY1 1321 aaPredicted RBP34.08■■■■□ 3.05
RDX-204ENST00000528498 CARMIL1Q5VZK9 1371 aa34.07■■■■□ 3.04
RDX-204ENST00000528498 WDR97A6NE52 1622 aa34.02■■■■□ 3.04
RDX-204ENST00000528498 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.03
RDX-204ENST00000528498 HRCP23327 699 aa34■■■■□ 3.03
RDX-204ENST00000528498 MRC2Q9UBG0 1479 aa33.96■■■■□ 3.03
RDX-204ENST00000528498 VPS8Q8N3P4 1428 aa33.91■■■■□ 3.02
RDX-204ENST00000528498 TARBP1Q13395 1621 aaKnown RBP33.89■■■■□ 3.02
RDX-204ENST00000528498 ABCA5Q8WWZ7 1642 aa33.87■■■■□ 3.01
RDX-204ENST00000528498 ARAP1Q96P48 1450 aa33.85■■■■□ 3.01
RDX-204ENST00000528498 GAPVD1Q14C86 1478 aa33.83■■■■□ 3.01
RDX-204ENST00000528498 ERCC6Q03468 1493 aa33.8■■■■□ 3
RDX-204ENST00000528498 ARHGAP35Q9NRY4 1499 aa33.78■■■■□ 3
RDX-204ENST00000528498 CUL7Q14999 1698 aa33.76■■■■□ 3
RDX-204ENST00000528498 WDR62O43379 1518 aa33.75■■■□□ 2.99
RDX-204ENST00000528498 AQRO60306 1485 aaKnown RBP eCLIP33.71■■■□□ 2.99
RDX-204ENST00000528498 ZNF608Q9ULD9 1512 aaPredicted RBP33.63■■■□□ 2.97
RDX-204ENST00000528498 THOC2Q8NI27 1593 aaKnown RBP33.62■■■□□ 2.97
RDX-204ENST00000528498 APLP2Q06481 763 aa33.59■■■□□ 2.97
RDX-204ENST00000528498 PBRM1Q86U86 1689 aa33.59■■■□□ 2.97
RDX-204ENST00000528498 IFT140Q96RY7 1462 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms