RNA–Protein interactions for RNA: ENST00000341199.10

SIMC1-202, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIMC1, Length 2,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-202ENST00000341199 NISCHQ9Y2I1 1504 aa48.92■■■■■ 5.42
SIMC1-202ENST00000341199 CCDC180Q9P1Z9 1646 aa42.52■■■■■ 4.4
SIMC1-202ENST00000341199 ZCCHC6Q5VYS8 1495 aaKnown RBP41.17■■■■■ 4.18
SIMC1-202ENST00000341199 DCAF1Q9Y4B6 1507 aa40.43■■■■■ 4.06
SIMC1-202ENST00000341199 DCAF8L2P0C7V8 631 aa40.27■■■■■ 4.04
SIMC1-202ENST00000341199 SHROOM4Q9ULL8 1493 aa40.13■■■■■ 4.01
SIMC1-202ENST00000341199 ABCC9O60706 1549 aa39.97■■■■□ 3.99
SIMC1-202ENST00000341199 MYO15BQ96JP2 1530 aa39.82■■■■□ 3.97
SIMC1-202ENST00000341199 NACADO15069 1562 aa39.51■■■■□ 3.92
SIMC1-202ENST00000341199 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
SIMC1-202ENST00000341199 RB1CC1Q8TDY2 1594 aa39.11■■■■□ 3.85
SIMC1-202ENST00000341199 SUPT5HO00267 1087 aaKnown RBP38.72■■■■□ 3.79
SIMC1-202ENST00000341199 UNC13AQ9UPW8 1703 aa38.39■■■■□ 3.74
SIMC1-202ENST00000341199 RSF1Q96T23 1441 aaPredicted RBP38.07■■■■□ 3.68
SIMC1-202ENST00000341199 CECR2Q9BXF3 1484 aa38.02■■■■□ 3.68
SIMC1-202ENST00000341199 BICRAQ9NZM4 1560 aa37.98■■■■□ 3.67
SIMC1-202ENST00000341199 MROH2BQ7Z745 1585 aa37.83■■■■□ 3.65
SIMC1-202ENST00000341199 PABPN1Q86U42 306 aaKnown RBP eCLIP37.75■■■■□ 3.63
SIMC1-202ENST00000341199 BAZ1AQ9NRL2 1556 aaPredicted RBP37.73■■■■□ 3.63
SIMC1-202ENST00000341199 SMARCA4P51532 1647 aa37.56■■■■□ 3.6
SIMC1-202ENST00000341199 WIZO95785 1651 aa37.54■■■■□ 3.6
SIMC1-202ENST00000341199 CHIC1Q5VXU3 224 aa37.24■■■■□ 3.55
SIMC1-202ENST00000341199 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
SIMC1-202ENST00000341199 PEG3Q9GZU2 1588 aa37.07■■■■□ 3.53
SIMC1-202ENST00000341199 ATAD2BQ9ULI0 1458 aa36.86■■■■□ 3.49
SIMC1-202ENST00000341199 SMARCA2P51531 1590 aa36.82■■■■□ 3.49
SIMC1-202ENST00000341199 EIF4G1Q04637 1599 aaKnown RBP36.78■■■■□ 3.48
SIMC1-202ENST00000341199 CCDC88BA6NC98 1476 aa36.78■■■■□ 3.48
SIMC1-202ENST00000341199 BAZ1BQ9UIG0 1483 aaKnown RBP36.65■■■■□ 3.46
SIMC1-202ENST00000341199 NCAPD3P42695 1498 aa36.47■■■■□ 3.43
SIMC1-202ENST00000341199 HMGXB3Q12766 1538 aa36.46■■■■□ 3.43
SIMC1-202ENST00000341199 TRIM41Q8WV44 630 aa36.36■■■■□ 3.41
SIMC1-202ENST00000341199 CC2D2AQ9P2K1 1620 aa36.17■■■■□ 3.38
SIMC1-202ENST00000341199 ABCC8Q09428 1581 aa36.11■■■■□ 3.37
SIMC1-202ENST00000341199 LOC105371045A0A1W2PR82 267 aa35.82■■■■□ 3.33
SIMC1-202ENST00000341199 WRNQ14191 1432 aaPredicted RBP eCLIP35.8■■■■□ 3.32
SIMC1-202ENST00000341199 CFTRP13569 1480 aa35.75■■■■□ 3.31
SIMC1-202ENST00000341199 FAM9AQ8IZU1 332 aaPredicted RBP35.74■■■■□ 3.31
SIMC1-202ENST00000341199 SYNJ1O43426 1573 aa35.69■■■■□ 3.3
SIMC1-202ENST00000341199 PRDM2Q13029 1718 aa35.6■■■■□ 3.29
SIMC1-202ENST00000341199 CADPSQ9ULU8 1353 aa35.55■■■■□ 3.28
SIMC1-202ENST00000341199 TOP2BQ02880 1626 aa35.5■■■■□ 3.27
SIMC1-202ENST00000341199 SOGA1O94964 1423 aa35.48■■■■□ 3.27
SIMC1-202ENST00000341199 BIVM-ERCC5R4GMW8 1640 aa35.47■■■■□ 3.27
SIMC1-202ENST00000341199 EEA1Q15075 1411 aa35.42■■■■□ 3.26
SIMC1-202ENST00000341199 CUX1P39880 1505 aa35.35■■■■□ 3.25
SIMC1-202ENST00000341199 RUSC2Q8N2Y8 1516 aa35.35■■■■□ 3.25
SIMC1-202ENST00000341199 EHMT2Q96KQ7 1210 aa35.24■■■■□ 3.23
SIMC1-202ENST00000341199 CSRNP3Q8WYN3 585 aa35.21■■■■□ 3.23
SIMC1-202ENST00000341199 DNAJC5BQ9UF47 199 aa35.2■■■■□ 3.23
SIMC1-202ENST00000341199 NESP48681 1621 aa35.2■■■■□ 3.23
SIMC1-202ENST00000341199 FANCD2Q9BXW9 1451 aa35.18■■■■□ 3.22
SIMC1-202ENST00000341199 LAMC3Q9Y6N6 1575 aa35.18■■■■□ 3.22
SIMC1-202ENST00000341199 KIF21BO75037 1637 aa34.99■■■■□ 3.19
SIMC1-202ENST00000341199 GOLGA3Q08378 1498 aa34.98■■■■□ 3.19
SIMC1-202ENST00000341199 CEP164Q9UPV0 1460 aa34.95■■■■□ 3.19
SIMC1-202ENST00000341199 DNMBPQ6XZF7 1577 aa34.93■■■■□ 3.18
SIMC1-202ENST00000341199 TNIKQ9UKE5 1360 aa34.92■■■■□ 3.18
SIMC1-202ENST00000341199 FGD5Q6ZNL6 1462 aa34.91■■■■□ 3.18
SIMC1-202ENST00000341199 PDS5BQ9NTI5 1447 aa34.88■■■■□ 3.17
SIMC1-202ENST00000341199 KIF27Q86VH2 1401 aa34.86■■■■□ 3.17
SIMC1-202ENST00000341199 TOPBP1Q92547 1522 aa34.85■■■■□ 3.17
SIMC1-202ENST00000341199 KIF21AQ7Z4S6 1674 aa34.78■■■■□ 3.16
SIMC1-202ENST00000341199 UBTFP17480 764 aaKnown RBP34.77■■■■□ 3.16
SIMC1-202ENST00000341199 CEP162Q5TB80 1403 aa34.76■■■■□ 3.16
SIMC1-202ENST00000341199 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.15
SIMC1-202ENST00000341199 RAPGEF2Q9Y4G8 1499 aa34.74■■■■□ 3.15
SIMC1-202ENST00000341199 CUX2O14529 1486 aa34.73■■■■□ 3.15
SIMC1-202ENST00000341199 PRXQ9BXM0 1461 aa34.73■■■■□ 3.15
SIMC1-202ENST00000341199 POLA1P09884 1462 aaPredicted RBP34.69■■■■□ 3.14
SIMC1-202ENST00000341199 ERICH3Q5RHP9 1530 aa34.69■■■■□ 3.14
SIMC1-202ENST00000341199 RAD54L2Q9Y4B4 1467 aa34.6■■■■□ 3.13
SIMC1-202ENST00000341199 ABCA10Q8WWZ4 1543 aa34.6■■■■□ 3.13
SIMC1-202ENST00000341199 IGF1RP08069 1367 aa34.54■■■■□ 3.12
SIMC1-202ENST00000341199 WDR97A6NE52 1622 aa34.5■■■■□ 3.11
SIMC1-202ENST00000341199 MRC2Q9UBG0 1479 aa34.46■■■■□ 3.11
SIMC1-202ENST00000341199 PCGF6Q9BYE7 350 aa34.45■■■■□ 3.11
SIMC1-202ENST00000341199 CLIP1P30622 1438 aa34.42■■■■□ 3.1
SIMC1-202ENST00000341199 TRIM26Q12899 539 aaPredicted RBP34.38■■■■□ 3.09
SIMC1-202ENST00000341199 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
SIMC1-202ENST00000341199 ABCA5Q8WWZ7 1642 aa34.32■■■■□ 3.08
SIMC1-202ENST00000341199 TARBP1Q13395 1621 aaKnown RBP34.31■■■■□ 3.08
SIMC1-202ENST00000341199 WDR62O43379 1518 aa34.27■■■■□ 3.08
SIMC1-202ENST00000341199 CUL7Q14999 1698 aa34.25■■■■□ 3.07
SIMC1-202ENST00000341199 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
SIMC1-202ENST00000341199 ERCC6Q03468 1493 aa34.21■■■■□ 3.07
SIMC1-202ENST00000341199 GAPVD1Q14C86 1478 aa34.19■■■■□ 3.06
SIMC1-202ENST00000341199 VPS8Q8N3P4 1428 aa34.16■■■■□ 3.06
SIMC1-202ENST00000341199 RANGAP1P46060 587 aaPredicted RBP34.15■■■■□ 3.06
SIMC1-202ENST00000341199 THOC2Q8NI27 1593 aaKnown RBP34.13■■■■□ 3.05
SIMC1-202ENST00000341199 PPARGC1BQ86YN6 1023 aaKnown RBP34.13■■■■□ 3.05
SIMC1-202ENST00000341199 ARAP1Q96P48 1450 aa34.09■■■■□ 3.05
SIMC1-202ENST00000341199 IFT140Q96RY7 1462 aa34.07■■■■□ 3.05
SIMC1-202ENST00000341199 PBRM1Q86U86 1689 aa34.02■■■■□ 3.04
SIMC1-202ENST00000341199 ARHGAP35Q9NRY4 1499 aa34.01■■■■□ 3.04
SIMC1-202ENST00000341199 AQRO60306 1485 aaKnown RBP eCLIP33.96■■■■□ 3.03
SIMC1-202ENST00000341199 CTTNBP2Q8WZ74 1663 aa33.93■■■■□ 3.02
SIMC1-202ENST00000341199 ZNF608Q9ULD9 1512 aaPredicted RBP33.91■■■■□ 3.02
SIMC1-202ENST00000341199 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
SIMC1-202ENST00000341199 ADAMTS12P58397 1594 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms