RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 PELP1Q8IZL8 1130 aaKnown RBP32.43■■■□□ 2.78
BPTF-201ENST00000306378 MYT1Q01538 1121 aa32.1■■■□□ 2.73
BPTF-201ENST00000306378 CCER1Q8TC90 406 aaPredicted RBP30.66■■■□□ 2.5
BPTF-201ENST00000306378 ERICH6Q7L0X2 663 aa30.32■■■□□ 2.44
BPTF-201ENST00000306378 CENPBP07199 599 aaPredicted RBP30.3■■■□□ 2.44
BPTF-201ENST00000306378 YTHDC1Q96MU7 727 aaKnown RBP29.93■■■□□ 2.38
BPTF-201ENST00000306378 ZEB1P37275 1124 aaPredicted RBP29.91■■■□□ 2.38
BPTF-201ENST00000306378 TTBK1Q5TCY1 1321 aaPredicted RBP29.79■■■□□ 2.36
BPTF-201ENST00000306378 DCAF8L2P0C7V8 631 aa29.59■■■□□ 2.33
BPTF-201ENST00000306378 NEFLP07196 543 aa29.4■■■□□ 2.3
BPTF-201ENST00000306378 APLP2Q06481 763 aa29.32■■■□□ 2.28
BPTF-201ENST00000306378 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
BPTF-201ENST00000306378 PCGF6Q9BYE7 350 aa28.88■■■□□ 2.21
BPTF-201ENST00000306378 DAXXQ9UER7 740 aaPredicted RBP28.83■■■□□ 2.21
BPTF-201ENST00000306378 NISCHQ9Y2I1 1504 aa28.75■■■□□ 2.19
BPTF-201ENST00000306378 FAM9AQ8IZU1 332 aaPredicted RBP28.65■■■□□ 2.18
BPTF-201ENST00000306378 RTL5Q5HYW3 569 aaPredicted RBP28.53■■■□□ 2.16
BPTF-201ENST00000306378 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
BPTF-201ENST00000306378 GLIPR1L2Q4G1C9 344 aa28.09■■■□□ 2.09
BPTF-201ENST00000306378 ZNF316A6NFI3 1004 aaPredicted RBP28.08■■■□□ 2.09
BPTF-201ENST00000306378 HRCP23327 699 aa28.04■■■□□ 2.08
BPTF-201ENST00000306378 MYT1LQ9UL68 1186 aa27.93■■■□□ 2.06
BPTF-201ENST00000306378 TRIM26Q12899 539 aaPredicted RBP27.9■■■□□ 2.06
BPTF-201ENST00000306378 EHMT2Q96KQ7 1210 aa27.9■■■□□ 2.06
BPTF-201ENST00000306378 CLSPNQ9HAW4 1339 aa27.77■■■□□ 2.04
BPTF-201ENST00000306378 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
BPTF-201ENST00000306378 DIEXFQ68CQ4 756 aaKnown RBP27.33■■□□□ 1.97
BPTF-201ENST00000306378 CDK11AQ9UQ88 783 aaPredicted RBP27.33■■□□□ 1.96
BPTF-201ENST00000306378 UBTFP17480 764 aaKnown RBP27.23■■□□□ 1.95
BPTF-201ENST00000306378 ANP32BQ92688 251 aaKnown RBP27.21■■□□□ 1.95
BPTF-201ENST00000306378 ANP32AP39687 249 aaKnown RBP27.2■■□□□ 1.94
BPTF-201ENST00000306378 GTF3C3Q9Y5Q9 886 aa27.05■■□□□ 1.92
BPTF-201ENST00000306378 EIF5BO60841 1220 aaKnown RBP27.03■■□□□ 1.92
BPTF-201ENST00000306378 ATP1B4Q9UN42 357 aaPredicted RBP26.82■■□□□ 1.88
BPTF-201ENST00000306378 ACIN1Q9UKV3 1341 aaKnown RBP26.79■■□□□ 1.88
BPTF-201ENST00000306378 ZBTB47Q9UFB7 747 aaPredicted RBP26.77■■□□□ 1.88
BPTF-201ENST00000306378 TNNT2P45379 298 aaPredicted RBP26.77■■□□□ 1.88
BPTF-201ENST00000306378 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
BPTF-201ENST00000306378 ANP32CO43423 234 aa26.67■■□□□ 1.86
BPTF-201ENST00000306378 UPF2Q9HAU5 1272 aaKnown RBP26.53■■□□□ 1.84
BPTF-201ENST00000306378 POLR3GLQ9BT43 218 aa26.52■■□□□ 1.84
BPTF-201ENST00000306378 ANP32EQ9BTT0 268 aa26.52■■□□□ 1.84
BPTF-201ENST00000306378 TRIM44Q96DX7 344 aaPredicted RBP26.41■■□□□ 1.82
BPTF-201ENST00000306378 NCLP19338 710 aaKnown RBP26.39■■□□□ 1.82
BPTF-201ENST00000306378 BCANQ96GW7 911 aa26.39■■□□□ 1.81
BPTF-201ENST00000306378 HSP90AA1P07900 732 aaKnown RBP26.38■■□□□ 1.81
BPTF-201ENST00000306378 PPARGC1BQ86YN6 1023 aaKnown RBP26.38■■□□□ 1.81
BPTF-201ENST00000306378 NEFMP07197 916 aa26.37■■□□□ 1.81
BPTF-201ENST00000306378 CANXP27824 592 aaKnown RBP26.36■■□□□ 1.81
BPTF-201ENST00000306378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.26■■□□□ 1.79
BPTF-201ENST00000306378 HNRNPUL2Q1KMD3 747 aaKnown RBP26.23■■□□□ 1.79
BPTF-201ENST00000306378 ERICH6BQ5W0A0 696 aa26.23■■□□□ 1.79
BPTF-201ENST00000306378 CDK11BP21127 795 aaKnown RBP26.17■■□□□ 1.78
BPTF-201ENST00000306378 ITGAEP38570 1179 aa26.13■■□□□ 1.77
BPTF-201ENST00000306378 DDRGK1Q96HY6 314 aa26.1■■□□□ 1.77
BPTF-201ENST00000306378 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
BPTF-201ENST00000306378 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
BPTF-201ENST00000306378 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
BPTF-201ENST00000306378 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
BPTF-201ENST00000306378 NPM2Q86SE8 214 aaKnown RBP26.02■■□□□ 1.76
BPTF-201ENST00000306378 BECN1Q14457 450 aa26■■□□□ 1.75
BPTF-201ENST00000306378 NBR1Q14596 966 aa25.97■■□□□ 1.75
BPTF-201ENST00000306378 GOLGA6L22H0YM25 854 aa25.9■■□□□ 1.74
BPTF-201ENST00000306378 FKBP8Q14318 412 aa25.88■■□□□ 1.73
BPTF-201ENST00000306378 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.87■■□□□ 1.73
BPTF-201ENST00000306378 CNGB1Q14028 1251 aaPredicted RBP25.81■■□□□ 1.72
BPTF-201ENST00000306378 CCDC136Q96JN2 1154 aa25.8■■□□□ 1.72
BPTF-201ENST00000306378 PPM1GO15355 546 aaPredicted RBP25.77■■□□□ 1.72
BPTF-201ENST00000306378 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
BPTF-201ENST00000306378 BCL11AQ9H165 835 aa25.71■■□□□ 1.71
BPTF-201ENST00000306378 FAM50AQ14320 339 aaKnown RBP25.7■■□□□ 1.7
BPTF-201ENST00000306378 NAP1L5Q96NT1 182 aaPredicted RBP25.66■■□□□ 1.7
BPTF-201ENST00000306378 SCAF1Q9H7N4 1312 aaKnown RBP25.65■■□□□ 1.7
BPTF-201ENST00000306378 CHAF1AQ13111 956 aaPredicted RBP25.65■■□□□ 1.7
BPTF-201ENST00000306378 NEUROD1Q13562 356 aa25.63■■□□□ 1.69
BPTF-201ENST00000306378 TRIM52Q96A61 297 aa25.59■■□□□ 1.69
BPTF-201ENST00000306378 GOLGA6L6A8MZA4 724 aa25.58■■□□□ 1.69
BPTF-201ENST00000306378 HNRNPUQ00839 825 aaKnown RBP eCLIP25.54■■□□□ 1.68
BPTF-201ENST00000306378 PTMAP06454 111 aaKnown RBP25.54■■□□□ 1.68
BPTF-201ENST00000306378 NRDCO43847 1150 aa25.53■■□□□ 1.68
BPTF-201ENST00000306378 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
BPTF-201ENST00000306378 L1TD1Q5T7N2 865 aaKnown RBP25.52■■□□□ 1.68
BPTF-201ENST00000306378 DNTTIP2Q5QJE6 756 aaKnown RBP25.52■■□□□ 1.68
BPTF-201ENST00000306378 MYH16Q9H6N6 1097 aa25.51■■□□□ 1.67
BPTF-201ENST00000306378 ZRSR1Q15695 479 aaKnown RBP25.45■■□□□ 1.67
BPTF-201ENST00000306378 NOP58Q9Y2X3 529 aaKnown RBP25.41■■□□□ 1.66
BPTF-201ENST00000306378 ARID4BQ4LE39 1312 aaPredicted RBP25.41■■□□□ 1.66
BPTF-201ENST00000306378 ARXQ96QS3 562 aa25.41■■□□□ 1.66
BPTF-201ENST00000306378 ZNF326Q5BKZ1 582 aaKnown RBP25.36■■□□□ 1.65
BPTF-201ENST00000306378 PTMSP20962 102 aa25.36■■□□□ 1.65
BPTF-201ENST00000306378 CASC1Q6TDU7 716 aa25.33■■□□□ 1.65
BPTF-201ENST00000306378 MSNP26038 577 aaKnown RBP25.32■■□□□ 1.64
BPTF-201ENST00000306378 USP35Q9P2H5 1018 aa25.22■■□□□ 1.63
BPTF-201ENST00000306378 RSPH6AQ9H0K4 717 aa25.2■■□□□ 1.63
BPTF-201ENST00000306378 TMC1Q8TDI8 760 aa25.2■■□□□ 1.62
BPTF-201ENST00000306378 TNNT3P45378 269 aaPredicted RBP25.17■■□□□ 1.62
BPTF-201ENST00000306378 SLC24A1O60721 1099 aa25.17■■□□□ 1.62
BPTF-201ENST00000306378 DEKP35659 375 aaKnown RBP25.13■■□□□ 1.61
BPTF-201ENST00000306378 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.61
BPTF-201ENST00000306378 CHMP4BQ9H444 224 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms