RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 NISCHQ9Y2I1 1504 aa48.35■■■■■ 5.33
RITA1-202ENST00000549621 CCDC180Q9P1Z9 1646 aa41.93■■■■■ 4.3
RITA1-202ENST00000549621 ZCCHC6Q5VYS8 1495 aaKnown RBP40.74■■■■■ 4.11
RITA1-202ENST00000549621 DCAF1Q9Y4B6 1507 aa39.93■■■■□ 3.98
RITA1-202ENST00000549621 SHROOM4Q9ULL8 1493 aa39.86■■■■□ 3.97
RITA1-202ENST00000549621 DCAF8L2P0C7V8 631 aa39.73■■■■□ 3.95
RITA1-202ENST00000549621 ABCC9O60706 1549 aa39.27■■■■□ 3.88
RITA1-202ENST00000549621 MYO15BQ96JP2 1530 aa39.25■■■■□ 3.87
RITA1-202ENST00000549621 NACADO15069 1562 aa38.9■■■■□ 3.82
RITA1-202ENST00000549621 SCRIBQ14160 1630 aa38.71■■■■□ 3.79
RITA1-202ENST00000549621 SUPT5HO00267 1087 aaKnown RBP38.51■■■■□ 3.76
RITA1-202ENST00000549621 RB1CC1Q8TDY2 1594 aa38.46■■■■□ 3.75
RITA1-202ENST00000549621 UNC13AQ9UPW8 1703 aa37.84■■■■□ 3.65
RITA1-202ENST00000549621 RSF1Q96T23 1441 aaPredicted RBP37.71■■■■□ 3.63
RITA1-202ENST00000549621 CECR2Q9BXF3 1484 aa37.59■■■■□ 3.61
RITA1-202ENST00000549621 MROH2BQ7Z745 1585 aa37.43■■■■□ 3.58
RITA1-202ENST00000549621 BICRAQ9NZM4 1560 aa37.39■■■■□ 3.58
RITA1-202ENST00000549621 BAZ1AQ9NRL2 1556 aaPredicted RBP37.27■■■■□ 3.56
RITA1-202ENST00000549621 WIZO95785 1651 aa37.17■■■■□ 3.54
RITA1-202ENST00000549621 CHIC1Q5VXU3 224 aa37.12■■■■□ 3.53
RITA1-202ENST00000549621 PABPN1Q86U42 306 aaKnown RBP eCLIP37.1■■■■□ 3.53
RITA1-202ENST00000549621 SMARCA4P51532 1647 aa37.1■■■■□ 3.53
RITA1-202ENST00000549621 TOP2AP11388 1531 aaKnown RBP36.74■■■■□ 3.47
RITA1-202ENST00000549621 PEG3Q9GZU2 1588 aa36.59■■■■□ 3.45
RITA1-202ENST00000549621 SMARCA2P51531 1590 aa36.44■■■■□ 3.42
RITA1-202ENST00000549621 EIF4G1Q04637 1599 aaKnown RBP36.4■■■■□ 3.42
RITA1-202ENST00000549621 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
RITA1-202ENST00000549621 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
RITA1-202ENST00000549621 BAZ1BQ9UIG0 1483 aaKnown RBP36.15■■■■□ 3.38
RITA1-202ENST00000549621 TRIM41Q8WV44 630 aa36.12■■■■□ 3.37
RITA1-202ENST00000549621 HMGXB3Q12766 1538 aa35.92■■■■□ 3.34
RITA1-202ENST00000549621 NCAPD3P42695 1498 aa35.9■■■■□ 3.34
RITA1-202ENST00000549621 ABCC8Q09428 1581 aa35.83■■■■□ 3.33
RITA1-202ENST00000549621 LOC105371045A0A1W2PR82 267 aa35.75■■■■□ 3.31
RITA1-202ENST00000549621 FAM9AQ8IZU1 332 aaPredicted RBP35.55■■■■□ 3.28
RITA1-202ENST00000549621 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
RITA1-202ENST00000549621 WRNQ14191 1432 aaPredicted RBP eCLIP35.45■■■■□ 3.27
RITA1-202ENST00000549621 SYNJ1O43426 1573 aa35.37■■■■□ 3.25
RITA1-202ENST00000549621 CFTRP13569 1480 aa35.27■■■■□ 3.24
RITA1-202ENST00000549621 SOGA1O94964 1423 aa35.22■■■■□ 3.23
RITA1-202ENST00000549621 PRDM2Q13029 1718 aa35.17■■■■□ 3.22
RITA1-202ENST00000549621 EEA1Q15075 1411 aa35.14■■■■□ 3.22
RITA1-202ENST00000549621 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
RITA1-202ENST00000549621 BIVM-ERCC5R4GMW8 1640 aa35.11■■■■□ 3.21
RITA1-202ENST00000549621 RUSC2Q8N2Y8 1516 aa35.1■■■■□ 3.21
RITA1-202ENST00000549621 EHMT2Q96KQ7 1210 aa35.08■■■■□ 3.21
RITA1-202ENST00000549621 CADPSQ9ULU8 1353 aa35.01■■■■□ 3.2
RITA1-202ENST00000549621 CUX1P39880 1505 aa34.96■■■■□ 3.19
RITA1-202ENST00000549621 CSRNP3Q8WYN3 585 aa34.91■■■■□ 3.18
RITA1-202ENST00000549621 KIF21BO75037 1637 aa34.75■■■■□ 3.15
RITA1-202ENST00000549621 GOLGA3Q08378 1498 aa34.74■■■■□ 3.15
RITA1-202ENST00000549621 TNIKQ9UKE5 1360 aa34.7■■■■□ 3.15
RITA1-202ENST00000549621 CEP164Q9UPV0 1460 aa34.68■■■■□ 3.14
RITA1-202ENST00000549621 FANCD2Q9BXW9 1451 aa34.67■■■■□ 3.14
RITA1-202ENST00000549621 NESP48681 1621 aa34.66■■■■□ 3.14
RITA1-202ENST00000549621 LAMC3Q9Y6N6 1575 aa34.61■■■■□ 3.13
RITA1-202ENST00000549621 CEP162Q5TB80 1403 aa34.6■■■■□ 3.13
RITA1-202ENST00000549621 PCGF6Q9BYE7 350 aa34.59■■■■□ 3.13
RITA1-202ENST00000549621 DNAJC5BQ9UF47 199 aa34.55■■■■□ 3.12
RITA1-202ENST00000549621 UBTFP17480 764 aaKnown RBP34.51■■■■□ 3.12
RITA1-202ENST00000549621 FGD5Q6ZNL6 1462 aa34.48■■■■□ 3.11
RITA1-202ENST00000549621 RAPGEF2Q9Y4G8 1499 aa34.48■■■■□ 3.11
RITA1-202ENST00000549621 KIF27Q86VH2 1401 aa34.48■■■■□ 3.11
RITA1-202ENST00000549621 DNMBPQ6XZF7 1577 aa34.46■■■■□ 3.11
RITA1-202ENST00000549621 PRXQ9BXM0 1461 aa34.42■■■■□ 3.1
RITA1-202ENST00000549621 TRIM26Q12899 539 aaPredicted RBP34.42■■■■□ 3.1
RITA1-202ENST00000549621 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
RITA1-202ENST00000549621 TOPBP1Q92547 1522 aa34.37■■■■□ 3.09
RITA1-202ENST00000549621 CUX2O14529 1486 aa34.34■■■■□ 3.09
RITA1-202ENST00000549621 PDS5BQ9NTI5 1447 aa34.29■■■■□ 3.08
RITA1-202ENST00000549621 URB2Q14146 1524 aaKnown RBP34.26■■■■□ 3.07
RITA1-202ENST00000549621 KIF21AQ7Z4S6 1674 aa34.25■■■■□ 3.07
RITA1-202ENST00000549621 POLA1P09884 1462 aaPredicted RBP34.24■■■■□ 3.07
RITA1-202ENST00000549621 CLIP1P30622 1438 aa34.2■■■■□ 3.06
RITA1-202ENST00000549621 ABCA10Q8WWZ4 1543 aa34.16■■■■□ 3.06
RITA1-202ENST00000549621 RAD54L2Q9Y4B4 1467 aa34.16■■■■□ 3.06
RITA1-202ENST00000549621 IGF1RP08069 1367 aa34.15■■■■□ 3.06
RITA1-202ENST00000549621 WDR97A6NE52 1622 aa34.08■■■■□ 3.05
RITA1-202ENST00000549621 PPARGC1BQ86YN6 1023 aaKnown RBP34.06■■■■□ 3.04
RITA1-202ENST00000549621 HRCP23327 699 aa33.99■■■■□ 3.03
RITA1-202ENST00000549621 VPS8Q8N3P4 1428 aa33.98■■■■□ 3.03
RITA1-202ENST00000549621 CARMIL1Q5VZK9 1371 aa33.97■■■■□ 3.03
RITA1-202ENST00000549621 ABCA5Q8WWZ7 1642 aa33.89■■■■□ 3.02
RITA1-202ENST00000549621 RANGAP1P46060 587 aaPredicted RBP33.88■■■■□ 3.01
RITA1-202ENST00000549621 MRC2Q9UBG0 1479 aa33.88■■■■□ 3.01
RITA1-202ENST00000549621 ARAP1Q96P48 1450 aa33.87■■■■□ 3.01
RITA1-202ENST00000549621 CUL7Q14999 1698 aa33.87■■■■□ 3.01
RITA1-202ENST00000549621 TARBP1Q13395 1621 aaKnown RBP33.84■■■■□ 3.01
RITA1-202ENST00000549621 ARHGAP35Q9NRY4 1499 aa33.75■■■□□ 2.99
RITA1-202ENST00000549621 TDRD9Q8NDG6 1382 aaKnown RBP33.75■■■□□ 2.99
RITA1-202ENST00000549621 GAPVD1Q14C86 1478 aa33.74■■■□□ 2.99
RITA1-202ENST00000549621 WDR62O43379 1518 aa33.71■■■□□ 2.99
RITA1-202ENST00000549621 TTBK1Q5TCY1 1321 aaPredicted RBP33.7■■■□□ 2.99
RITA1-202ENST00000549621 CTTNBP2Q8WZ74 1663 aa33.61■■■□□ 2.97
RITA1-202ENST00000549621 PBRM1Q86U86 1689 aa33.59■■■□□ 2.97
RITA1-202ENST00000549621 ERCC6Q03468 1493 aa33.56■■■□□ 2.96
RITA1-202ENST00000549621 THOC2Q8NI27 1593 aaKnown RBP33.54■■■□□ 2.96
RITA1-202ENST00000549621 APLP2Q06481 763 aa33.52■■■□□ 2.96
RITA1-202ENST00000549621 IFT140Q96RY7 1462 aa33.52■■■□□ 2.96
RITA1-202ENST00000549621 AQRO60306 1485 aaKnown RBP eCLIP33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms