RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
SOX12-201ENST00000342665 DCAF8L2P0C7V8 631 aa34.93■■■■□ 3.18
SOX12-201ENST00000342665 SUPT5HO00267 1087 aaKnown RBP33.7■■■□□ 2.98
SOX12-201ENST00000342665 SHROOM4Q9ULL8 1493 aa33.26■■■□□ 2.91
SOX12-201ENST00000342665 EHMT2Q96KQ7 1210 aa32.01■■■□□ 2.72
SOX12-201ENST00000342665 FAM9AQ8IZU1 332 aaPredicted RBP31.6■■■□□ 2.65
SOX12-201ENST00000342665 PCGF6Q9BYE7 350 aa31.54■■■□□ 2.64
SOX12-201ENST00000342665 APLP2Q06481 763 aa31.43■■■□□ 2.62
SOX12-201ENST00000342665 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
SOX12-201ENST00000342665 ZEB1P37275 1124 aaPredicted RBP30.97■■■□□ 2.55
SOX12-201ENST00000342665 TTBK1Q5TCY1 1321 aaPredicted RBP30.97■■■□□ 2.55
SOX12-201ENST00000342665 PELP1Q8IZL8 1130 aaKnown RBP30.86■■■□□ 2.53
SOX12-201ENST00000342665 CCER1Q8TC90 406 aaPredicted RBP30.7■■■□□ 2.51
SOX12-201ENST00000342665 UBTFP17480 764 aaKnown RBP30.67■■■□□ 2.5
SOX12-201ENST00000342665 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
SOX12-201ENST00000342665 RANGAP1P46060 587 aaPredicted RBP30.62■■■□□ 2.49
SOX12-201ENST00000342665 TRIM26Q12899 539 aaPredicted RBP30.46■■■□□ 2.47
SOX12-201ENST00000342665 CENPBP07199 599 aaPredicted RBP30.45■■■□□ 2.47
SOX12-201ENST00000342665 LOC105371045A0A1W2PR82 267 aa30.32■■■□□ 2.44
SOX12-201ENST00000342665 HRCP23327 699 aa30.3■■■□□ 2.44
SOX12-201ENST00000342665 PPARGC1BQ86YN6 1023 aaKnown RBP30.23■■■□□ 2.43
SOX12-201ENST00000342665 ATP1B4Q9UN42 357 aaPredicted RBP30.22■■■□□ 2.43
SOX12-201ENST00000342665 YTHDC1Q96MU7 727 aaKnown RBP29.72■■■□□ 2.35
SOX12-201ENST00000342665 ABCC9O60706 1549 aa29.67■■■□□ 2.34
SOX12-201ENST00000342665 HNRNPUL2Q1KMD3 747 aaKnown RBP29.57■■■□□ 2.32
SOX12-201ENST00000342665 NEFLP07196 543 aa29.53■■■□□ 2.32
SOX12-201ENST00000342665 ITGAEP38570 1179 aa29.51■■■□□ 2.31
SOX12-201ENST00000342665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.41■■■□□ 2.3
SOX12-201ENST00000342665 ERICH6Q7L0X2 663 aa29.4■■■□□ 2.3
SOX12-201ENST00000342665 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.292e-7■■□□□ 11.6
SOX12-201ENST00000342665 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
SOX12-201ENST00000342665 DIEXFQ68CQ4 756 aaKnown RBP29.16■■■□□ 2.26
SOX12-201ENST00000342665 MYT1Q01538 1121 aa29.01■■■□□ 2.23
SOX12-201ENST00000342665 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
SOX12-201ENST00000342665 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
SOX12-201ENST00000342665 FAM50AQ14320 339 aaKnown RBP28.88■■■□□ 2.21
SOX12-201ENST00000342665 POLR3GLQ9BT43 218 aa28.85■■■□□ 2.21
SOX12-201ENST00000342665 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
SOX12-201ENST00000342665 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
SOX12-201ENST00000342665 MYT1LQ9UL68 1186 aa28.7■■■□□ 2.18
SOX12-201ENST00000342665 ZNF316A6NFI3 1004 aaPredicted RBP28.64■■■□□ 2.18
SOX12-201ENST00000342665 NEUROD1Q13562 356 aa28.61■■■□□ 2.17
SOX12-201ENST00000342665 TRIM52Q96A61 297 aa28.57■■■□□ 2.16
SOX12-201ENST00000342665 CNGB1Q14028 1251 aaPredicted RBP28.57■■■□□ 2.16
SOX12-201ENST00000342665 GTF3C3Q9Y5Q9 886 aa28.48■■■□□ 2.15
SOX12-201ENST00000342665 P3H3Q8IVL6 736 aa28.37■■■□□ 2.13
SOX12-201ENST00000342665 ANP32CO43423 234 aa28.35■■■□□ 2.13
SOX12-201ENST00000342665 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
SOX12-201ENST00000342665 DAXXQ9UER7 740 aaPredicted RBP28.31■■■□□ 2.12
SOX12-201ENST00000342665 ACIN1Q9UKV3 1341 aaKnown RBP28.29■■■□□ 2.12
SOX12-201ENST00000342665 MYO15BQ96JP2 1530 aa28.27■■■□□ 2.12
SOX12-201ENST00000342665 FBLN2P98095 1184 aa28.17■■■□□ 2.1
SOX12-201ENST00000342665 ZNF326Q5BKZ1 582 aaKnown RBP28.13■■■□□ 2.09
SOX12-201ENST00000342665 BCANQ96GW7 911 aa28.08■■■□□ 2.09
SOX12-201ENST00000342665 SLC4A1APQ9BWU0 796 aaKnown RBP28.07■■■□□ 2.08
SOX12-201ENST00000342665 RB1CC1Q8TDY2 1594 aa28.04■■■□□ 2.08
SOX12-201ENST00000342665 ARID3CA6NKF2 412 aa28.02■■■□□ 2.08
SOX12-201ENST00000342665 EEA1Q15075 1411 aa28.01■■■□□ 2.07
SOX12-201ENST00000342665 CDK11AQ9UQ88 783 aaPredicted RBP28.01■■■□□ 2.07
SOX12-201ENST00000342665 NACADO15069 1562 aa27.99■■■□□ 2.07
SOX12-201ENST00000342665 CLIP1P30622 1438 aa27.96■■■□□ 2.07
SOX12-201ENST00000342665 TONSLQ96HA7 1378 aa27.89■■■□□ 2.05
SOX12-201ENST00000342665 CLSPNQ9HAW4 1339 aa27.87■■■□□ 2.05
SOX12-201ENST00000342665 CEP162Q5TB80 1403 aa27.85■■■□□ 2.05
SOX12-201ENST00000342665 ZNF777Q9ULD5 760 aaPredicted RBP27.85■■■□□ 2.05
SOX12-201ENST00000342665 RTL5Q5HYW3 569 aaPredicted RBP27.84■■■□□ 2.05
SOX12-201ENST00000342665 GOLGA3Q08378 1498 aa27.82■■■□□ 2.04
SOX12-201ENST00000342665 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.042e-6■■■■□ 22.3
SOX12-201ENST00000342665 DDX10Q13206 875 aaKnown RBP27.76■■■□□ 2.03
SOX12-201ENST00000342665 TNIKQ9UKE5 1360 aa27.75■■■□□ 2.03
SOX12-201ENST00000342665 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
SOX12-201ENST00000342665 BAZ1AQ9NRL2 1556 aaPredicted RBP27.66■■■□□ 2.02
SOX12-201ENST00000342665 MTUS2Q5JR59 1369 aa27.65■■■□□ 2.02
SOX12-201ENST00000342665 CHIC2Q9UKJ5 165 aa27.61■■■□□ 2.01
SOX12-201ENST00000342665 BAZ1BQ9UIG0 1483 aaKnown RBP27.61■■■□□ 2.01
SOX12-201ENST00000342665 MIER1Q8N108 512 aa27.6■■■□□ 2.01
SOX12-201ENST00000342665 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
SOX12-201ENST00000342665 FKBP8Q14318 412 aa27.57■■■□□ 2
SOX12-201ENST00000342665 HNRNPUQ00839 825 aaKnown RBP eCLIP27.55■■■□□ 2
SOX12-201ENST00000342665 KIF27Q86VH2 1401 aa27.51■■□□□ 1.99
SOX12-201ENST00000342665 SCAF1Q9H7N4 1312 aaKnown RBP27.48■■□□□ 1.99
SOX12-201ENST00000342665 FAM9BQ8IZU0 186 aa27.42■■□□□ 1.98
SOX12-201ENST00000342665 TSPY4P0CV99 314 aa27.4■■□□□ 1.98
SOX12-201ENST00000342665 TSPY10P0CW01 314 aa27.4■■□□□ 1.98
SOX12-201ENST00000342665 CANXP27824 592 aaKnown RBP27.38■■□□□ 1.97
SOX12-201ENST00000342665 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
SOX12-201ENST00000342665 SOGA1O94964 1423 aa27.33■■□□□ 1.97
SOX12-201ENST00000342665 CHMP7Q8WUX9 453 aaPredicted RBP27.33■■□□□ 1.96
SOX12-201ENST00000342665 ANP32AP39687 249 aaKnown RBP27.32■■□□□ 1.96
SOX12-201ENST00000342665 HIRIP3Q9BW71 556 aaPredicted RBP27.31■■□□□ 1.96
SOX12-201ENST00000342665 RRP7BPQ9NSQ0 103 aa27.31■■□□□ 1.96
SOX12-201ENST00000342665 NEFMP07197 916 aa27.3■■□□□ 1.96
SOX12-201ENST00000342665 EIF4G2P78344 907 aaKnown RBP eCLIP27.3■■□□□ 1.96
SOX12-201ENST00000342665 TMC1Q8TDI8 760 aa27.29■■□□□ 1.96
SOX12-201ENST00000342665 ZBTB47Q9UFB7 747 aaPredicted RBP27.28■■□□□ 1.96
SOX12-201ENST00000342665 MRS2Q9HD23 443 aa27.27■■□□□ 1.96
SOX12-201ENST00000342665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.23■■□□□ 1.955e-7■■■■□ 21.2
SOX12-201ENST00000342665 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
SOX12-201ENST00000342665 CHGAP10645 457 aaKnown RBP27.18■■□□□ 1.94
SOX12-201ENST00000342665 KDM2AQ9Y2K7 1162 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms