RNA–Protein interactions for RNA: ENST00000295317.3

RNF149-201, Transcript of ring finger protein 149, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF149, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-201ENST00000295317 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
RNF149-201ENST00000295317 CCDC180Q9P1Z9 1646 aa39.51■■■■□ 3.92
RNF149-201ENST00000295317 SHROOM4Q9ULL8 1493 aa39.31■■■■□ 3.88
RNF149-201ENST00000295317 ZCCHC6Q5VYS8 1495 aaKnown RBP39.02■■■■□ 3.84
RNF149-201ENST00000295317 DCAF8L2P0C7V8 631 aa38.87■■■■□ 3.81
RNF149-201ENST00000295317 SUPT5HO00267 1087 aaKnown RBP38.23■■■■□ 3.71
RNF149-201ENST00000295317 DCAF1Q9Y4B6 1507 aa37.85■■■■□ 3.65
RNF149-201ENST00000295317 ABCC9O60706 1549 aa37.43■■■■□ 3.58
RNF149-201ENST00000295317 SCRIBQ14160 1630 aa37.17■■■■□ 3.54
RNF149-201ENST00000295317 MYO15BQ96JP2 1530 aa36.94■■■■□ 3.5
RNF149-201ENST00000295317 CHIC1Q5VXU3 224 aa36.76■■■■□ 3.47
RNF149-201ENST00000295317 NACADO15069 1562 aa36.72■■■■□ 3.47
RNF149-201ENST00000295317 RSF1Q96T23 1441 aaPredicted RBP36.46■■■■□ 3.43
RNF149-201ENST00000295317 CECR2Q9BXF3 1484 aa36.3■■■■□ 3.4
RNF149-201ENST00000295317 RB1CC1Q8TDY2 1594 aa36.29■■■■□ 3.4
RNF149-201ENST00000295317 MROH2BQ7Z745 1585 aa36.05■■■■□ 3.36
RNF149-201ENST00000295317 WIZO95785 1651 aa35.82■■■■□ 3.32
RNF149-201ENST00000295317 UNC13AQ9UPW8 1703 aa35.8■■■■□ 3.32
RNF149-201ENST00000295317 LOC105371045A0A1W2PR82 267 aa35.78■■■■□ 3.32
RNF149-201ENST00000295317 PABPN1Q86U42 306 aaKnown RBP eCLIP35.76■■■■□ 3.32
RNF149-201ENST00000295317 BAZ1AQ9NRL2 1556 aaPredicted RBP35.56■■■■□ 3.28
RNF149-201ENST00000295317 TRIM41Q8WV44 630 aa35.55■■■■□ 3.28
RNF149-201ENST00000295317 BICRAQ9NZM4 1560 aa35.41■■■■□ 3.26
RNF149-201ENST00000295317 FAM9AQ8IZU1 332 aaPredicted RBP35.4■■■■□ 3.26
RNF149-201ENST00000295317 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
RNF149-201ENST00000295317 EHMT2Q96KQ7 1210 aa35.24■■■■□ 3.23
RNF149-201ENST00000295317 TOP2AP11388 1531 aaKnown RBP35.15■■■■□ 3.22
RNF149-201ENST00000295317 CCDC88BA6NC98 1476 aa35.08■■■■□ 3.21
RNF149-201ENST00000295317 PCGF6Q9BYE7 350 aa35.06■■■■□ 3.2
RNF149-201ENST00000295317 SMARCA2P51531 1590 aa34.98■■■■□ 3.19
RNF149-201ENST00000295317 EIF4G1Q04637 1599 aaKnown RBP34.95■■■■□ 3.19
RNF149-201ENST00000295317 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
RNF149-201ENST00000295317 ATAD2BQ9ULI0 1458 aa34.67■■■■□ 3.14
RNF149-201ENST00000295317 PEG3Q9GZU2 1588 aa34.64■■■■□ 3.14
RNF149-201ENST00000295317 BAZ1BQ9UIG0 1483 aaKnown RBP34.54■■■■□ 3.12
RNF149-201ENST00000295317 HRCP23327 699 aa34.47■■■■□ 3.11
RNF149-201ENST00000295317 SOGA1O94964 1423 aa34.41■■■■□ 3.1
RNF149-201ENST00000295317 TRIM26Q12899 539 aaPredicted RBP34.38■■■■□ 3.09
RNF149-201ENST00000295317 RUSC2Q8N2Y8 1516 aa34.31■■■■□ 3.08
RNF149-201ENST00000295317 PPARGC1BQ86YN6 1023 aaKnown RBP34.3■■■■□ 3.08
RNF149-201ENST00000295317 WRNQ14191 1432 aaPredicted RBP eCLIP34.26■■■■□ 3.07
RNF149-201ENST00000295317 SYNJ1O43426 1573 aa34.13■■■■□ 3.05
RNF149-201ENST00000295317 CSRNP3Q8WYN3 585 aa34.1■■■■□ 3.05
RNF149-201ENST00000295317 NCAPD3P42695 1498 aa34.04■■■■□ 3.04
RNF149-201ENST00000295317 UBTFP17480 764 aaKnown RBP33.99■■■■□ 3.03
RNF149-201ENST00000295317 HMGXB3Q12766 1538 aa33.93■■■■□ 3.02
RNF149-201ENST00000295317 TTBK1Q5TCY1 1321 aaPredicted RBP33.9■■■■□ 3.02
RNF149-201ENST00000295317 CEP162Q5TB80 1403 aa33.88■■■■□ 3.01
RNF149-201ENST00000295317 EEA1Q15075 1411 aa33.87■■■■□ 3.01
RNF149-201ENST00000295317 TNIKQ9UKE5 1360 aa33.8■■■■□ 3
RNF149-201ENST00000295317 GOLGA3Q08378 1498 aa33.72■■■□□ 2.99
RNF149-201ENST00000295317 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
RNF149-201ENST00000295317 RANGAP1P46060 587 aaPredicted RBP33.67■■■□□ 2.98
RNF149-201ENST00000295317 CFTRP13569 1480 aa33.62■■■□□ 2.97
RNF149-201ENST00000295317 CC2D2AQ9P2K1 1620 aa33.6■■■□□ 2.97
RNF149-201ENST00000295317 CEP164Q9UPV0 1460 aa33.58■■■□□ 2.97
RNF149-201ENST00000295317 CUX1P39880 1505 aa33.58■■■□□ 2.97
RNF149-201ENST00000295317 RAPGEF2Q9Y4G8 1499 aa33.57■■■□□ 2.96
RNF149-201ENST00000295317 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
RNF149-201ENST00000295317 KIF21BO75037 1637 aa33.49■■■□□ 2.95
RNF149-201ENST00000295317 CADPSQ9ULU8 1353 aa33.4■■■□□ 2.94
RNF149-201ENST00000295317 CLIP1P30622 1438 aa33.38■■■□□ 2.93
RNF149-201ENST00000295317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.33■■■□□ 2.93
RNF149-201ENST00000295317 DNAJC5BQ9UF47 199 aa33.23■■■□□ 2.91
RNF149-201ENST00000295317 KIF27Q86VH2 1401 aa33.22■■■□□ 2.91
RNF149-201ENST00000295317 PRXQ9BXM0 1461 aa33.21■■■□□ 2.91
RNF149-201ENST00000295317 NESP48681 1621 aa33.18■■■□□ 2.9
RNF149-201ENST00000295317 ZEB1P37275 1124 aaPredicted RBP33.18■■■□□ 2.9
RNF149-201ENST00000295317 PRDM2Q13029 1718 aa33.18■■■□□ 2.9
RNF149-201ENST00000295317 CUX2O14529 1486 aa33.11■■■□□ 2.89
RNF149-201ENST00000295317 VPS8Q8N3P4 1428 aa33.1■■■□□ 2.89
RNF149-201ENST00000295317 FANCD2Q9BXW9 1451 aa33.1■■■□□ 2.89
RNF149-201ENST00000295317 CCER1Q8TC90 406 aaPredicted RBP33.1■■■□□ 2.89
RNF149-201ENST00000295317 FGD5Q6ZNL6 1462 aa33.08■■■□□ 2.89
RNF149-201ENST00000295317 ERICH3Q5RHP9 1530 aa33.05■■■□□ 2.88
RNF149-201ENST00000295317 IGF1RP08069 1367 aa32.98■■■□□ 2.87
RNF149-201ENST00000295317 APLP2Q06481 763 aa32.98■■■□□ 2.87
RNF149-201ENST00000295317 HNRNPUL2Q1KMD3 747 aaKnown RBP32.92■■■□□ 2.86
RNF149-201ENST00000295317 ARAP1Q96P48 1450 aa32.92■■■□□ 2.86
RNF149-201ENST00000295317 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
RNF149-201ENST00000295317 CARMIL1Q5VZK9 1371 aa32.83■■■□□ 2.85
RNF149-201ENST00000295317 TOPBP1Q92547 1522 aa32.8■■■□□ 2.84
RNF149-201ENST00000295317 KANK4Q5T7N3 995 aaPredicted RBP32.79■■■□□ 2.84
RNF149-201ENST00000295317 POLA1P09884 1462 aaPredicted RBP32.77■■■□□ 2.84
RNF149-201ENST00000295317 DNMBPQ6XZF7 1577 aa32.75■■■□□ 2.83
RNF149-201ENST00000295317 ARHGAP35Q9NRY4 1499 aa32.75■■■□□ 2.83
RNF149-201ENST00000295317 URB2Q14146 1524 aaKnown RBP32.68■■■□□ 2.82
RNF149-201ENST00000295317 P3H3Q8IVL6 736 aa32.65■■■□□ 2.82
RNF149-201ENST00000295317 LAMC3Q9Y6N6 1575 aa32.64■■■□□ 2.82
RNF149-201ENST00000295317 ABCA10Q8WWZ4 1543 aa32.6■■■□□ 2.81
RNF149-201ENST00000295317 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.81
RNF149-201ENST00000295317 PDS5BQ9NTI5 1447 aa32.52■■■□□ 2.8
RNF149-201ENST00000295317 KIF21AQ7Z4S6 1674 aa32.48■■■□□ 2.79
RNF149-201ENST00000295317 ATP1B4Q9UN42 357 aaPredicted RBP32.44■■■□□ 2.78
RNF149-201ENST00000295317 ITGAEP38570 1179 aa32.35■■■□□ 2.77
RNF149-201ENST00000295317 FHOD3Q2V2M9 1422 aa32.35■■■□□ 2.77
RNF149-201ENST00000295317 WDR97A6NE52 1622 aa32.31■■■□□ 2.76
RNF149-201ENST00000295317 GAPVD1Q14C86 1478 aa32.3■■■□□ 2.76
RNF149-201ENST00000295317 CUL7Q14999 1698 aa32.25■■■□□ 2.75
RNF149-201ENST00000295317 ABCA5Q8WWZ7 1642 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms