RNA–Protein interactions for RNA: ENST00000336617.7

RNASEH2B-201, Transcript of ribonuclease H2 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNASEH2B, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH2B-201ENST00000336617 NISCHQ9Y2I1 1504 aa52.72■■■■■ 6.03
RNASEH2B-201ENST00000336617 CCDC180Q9P1Z9 1646 aa46.45■■■■■ 5.03
RNASEH2B-201ENST00000336617 ABCC9O60706 1549 aa44.71■■■■■ 4.75
RNASEH2B-201ENST00000336617 ZCCHC6Q5VYS8 1495 aaKnown RBP44.11■■■■■ 4.65
RNASEH2B-201ENST00000336617 DCAF8L2P0C7V8 631 aa43.66■■■■■ 4.58
RNASEH2B-201ENST00000336617 DCAF1Q9Y4B6 1507 aa43.62■■■■■ 4.57
RNASEH2B-201ENST00000336617 MYO15BQ96JP2 1530 aa43.48■■■■■ 4.55
RNASEH2B-201ENST00000336617 NACADO15069 1562 aa43.46■■■■■ 4.55
RNASEH2B-201ENST00000336617 RB1CC1Q8TDY2 1594 aa43.31■■■■■ 4.52
RNASEH2B-201ENST00000336617 SCRIBQ14160 1630 aa42.51■■■■■ 4.4
RNASEH2B-201ENST00000336617 UNC13AQ9UPW8 1703 aa42.43■■■■■ 4.38
RNASEH2B-201ENST00000336617 SHROOM4Q9ULL8 1493 aa42.2■■■■■ 4.35
RNASEH2B-201ENST00000336617 BICRAQ9NZM4 1560 aa42.08■■■■■ 4.33
RNASEH2B-201ENST00000336617 PABPN1Q86U42 306 aaKnown RBP eCLIP41.94■■■■■ 4.3
RNASEH2B-201ENST00000336617 CECR2Q9BXF3 1484 aa41.04■■■■■ 4.16
RNASEH2B-201ENST00000336617 EIF4G1Q04637 1599 aaKnown RBP40.85■■■■■ 4.13
RNASEH2B-201ENST00000336617 BAZ1AQ9NRL2 1556 aaPredicted RBP40.76■■■■■ 4.12
RNASEH2B-201ENST00000336617 SMARCA4P51532 1647 aa40.73■■■■■ 4.11
RNASEH2B-201ENST00000336617 MROH2BQ7Z745 1585 aa40.69■■■■■ 4.1
RNASEH2B-201ENST00000336617 RSF1Q96T23 1441 aaPredicted RBP40.51■■■■■ 4.08
RNASEH2B-201ENST00000336617 CC2D2AQ9P2K1 1620 aa40.48■■■■■ 4.07
RNASEH2B-201ENST00000336617 DNAJC5BQ9UF47 199 aa40.35■■■■■ 4.05
RNASEH2B-201ENST00000336617 PEG3Q9GZU2 1588 aa40.31■■■■■ 4.04
RNASEH2B-201ENST00000336617 ATAD2BQ9ULI0 1458 aa40.3■■■■■ 4.04
RNASEH2B-201ENST00000336617 WIZO95785 1651 aa40.29■■■■■ 4.04
RNASEH2B-201ENST00000336617 SMARCA2P51531 1590 aa40.24■■■■■ 4.03
RNASEH2B-201ENST00000336617 NCAPD3P42695 1498 aa40.13■■■■■ 4.01
RNASEH2B-201ENST00000336617 SUPT5HO00267 1087 aaKnown RBP40.09■■■■■ 4.01
RNASEH2B-201ENST00000336617 HMGXB3Q12766 1538 aa40■■■■□ 3.99
RNASEH2B-201ENST00000336617 BAZ1BQ9UIG0 1483 aaKnown RBP39.98■■■■□ 3.99
RNASEH2B-201ENST00000336617 TOP2AP11388 1531 aaKnown RBP39.86■■■■□ 3.97
RNASEH2B-201ENST00000336617 CCDC88BA6NC98 1476 aa39.42■■■■□ 3.9
RNASEH2B-201ENST00000336617 CADPSQ9ULU8 1353 aa39■■■■□ 3.83
RNASEH2B-201ENST00000336617 NESP48681 1621 aa38.98■■■■□ 3.83
RNASEH2B-201ENST00000336617 CFTRP13569 1480 aa38.96■■■■□ 3.83
RNASEH2B-201ENST00000336617 LAMC3Q9Y6N6 1575 aa38.91■■■■□ 3.82
RNASEH2B-201ENST00000336617 PRDM2Q13029 1718 aa38.7■■■■□ 3.79
RNASEH2B-201ENST00000336617 PDS5BQ9NTI5 1447 aa38.6■■■■□ 3.77
RNASEH2B-201ENST00000336617 FANCD2Q9BXW9 1451 aa38.56■■■■□ 3.76
RNASEH2B-201ENST00000336617 KIF21AQ7Z4S6 1674 aa38.51■■■■□ 3.76
RNASEH2B-201ENST00000336617 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
RNASEH2B-201ENST00000336617 ERCC6Q03468 1493 aa38.39■■■■□ 3.74
RNASEH2B-201ENST00000336617 ABCC8Q09428 1581 aa38.27■■■■□ 3.72
RNASEH2B-201ENST00000336617 MRC2Q9UBG0 1479 aa38.19■■■■□ 3.7
RNASEH2B-201ENST00000336617 THOC2Q8NI27 1593 aaKnown RBP38.18■■■■□ 3.7
RNASEH2B-201ENST00000336617 URB2Q14146 1524 aaKnown RBP38.17■■■■□ 3.7
RNASEH2B-201ENST00000336617 WRNQ14191 1432 aaPredicted RBP eCLIP38.13■■■■□ 3.69
RNASEH2B-201ENST00000336617 CUX1P39880 1505 aa38.11■■■■□ 3.69
RNASEH2B-201ENST00000336617 WDR62O43379 1518 aa38.06■■■■□ 3.68
RNASEH2B-201ENST00000336617 DNMBPQ6XZF7 1577 aa38.06■■■■□ 3.68
RNASEH2B-201ENST00000336617 TOPBP1Q92547 1522 aa38.05■■■■□ 3.68
RNASEH2B-201ENST00000336617 SYNJ1O43426 1573 aa38.05■■■■□ 3.68
RNASEH2B-201ENST00000336617 TOP2BQ02880 1626 aa37.97■■■■□ 3.67
RNASEH2B-201ENST00000336617 BIVM-ERCC5R4GMW8 1640 aa37.97■■■■□ 3.67
RNASEH2B-201ENST00000336617 CHIC1Q5VXU3 224 aa37.93■■■■□ 3.66
RNASEH2B-201ENST00000336617 FGD5Q6ZNL6 1462 aa37.82■■■■□ 3.65
RNASEH2B-201ENST00000336617 POLA1P09884 1462 aaPredicted RBP37.8■■■■□ 3.64
RNASEH2B-201ENST00000336617 TRIM41Q8WV44 630 aa37.77■■■■□ 3.64
RNASEH2B-201ENST00000336617 CUX2O14529 1486 aa37.74■■■■□ 3.63
RNASEH2B-201ENST00000336617 RAD54L2Q9Y4B4 1467 aa37.65■■■■□ 3.62
RNASEH2B-201ENST00000336617 SOGA1O94964 1423 aa37.62■■■■□ 3.61
RNASEH2B-201ENST00000336617 TARBP1Q13395 1621 aaKnown RBP37.6■■■■□ 3.61
RNASEH2B-201ENST00000336617 IFT140Q96RY7 1462 aa37.57■■■■□ 3.6
RNASEH2B-201ENST00000336617 WDR97A6NE52 1622 aa37.49■■■■□ 3.59
RNASEH2B-201ENST00000336617 ABCA10Q8WWZ4 1543 aa37.48■■■■□ 3.59
RNASEH2B-201ENST00000336617 ZNF608Q9ULD9 1512 aaPredicted RBP37.4■■■■□ 3.58
RNASEH2B-201ENST00000336617 TDRD9Q8NDG6 1382 aaKnown RBP37.35■■■■□ 3.57
RNASEH2B-201ENST00000336617 RUSC2Q8N2Y8 1516 aa37.29■■■■□ 3.56
RNASEH2B-201ENST00000336617 AQRO60306 1485 aaKnown RBP eCLIP37.28■■■■□ 3.56
RNASEH2B-201ENST00000336617 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
RNASEH2B-201ENST00000336617 EIF4G3O43432 1585 aaKnown RBP37.27■■■■□ 3.56
RNASEH2B-201ENST00000336617 KIF27Q86VH2 1401 aa37.24■■■■□ 3.55
RNASEH2B-201ENST00000336617 GAPVD1Q14C86 1478 aa37.21■■■■□ 3.55
RNASEH2B-201ENST00000336617 PBRM1Q86U86 1689 aa37.09■■■■□ 3.53
RNASEH2B-201ENST00000336617 GRIN2BQ13224 1484 aa37.07■■■■□ 3.53
RNASEH2B-201ENST00000336617 EEA1Q15075 1411 aa37.05■■■■□ 3.52
RNASEH2B-201ENST00000336617 IGF1RP08069 1367 aa37.04■■■■□ 3.52
RNASEH2B-201ENST00000336617 FAM9AQ8IZU1 332 aaPredicted RBP37.03■■■■□ 3.52
RNASEH2B-201ENST00000336617 ERICH3Q5RHP9 1530 aa37.02■■■■□ 3.52
RNASEH2B-201ENST00000336617 SNAPC4Q5SXM2 1469 aa36.94■■■■□ 3.5
RNASEH2B-201ENST00000336617 CSRNP3Q8WYN3 585 aa36.92■■■■□ 3.5
RNASEH2B-201ENST00000336617 MAGI1Q96QZ7 1491 aaPredicted RBP36.88■■■■□ 3.49
RNASEH2B-201ENST00000336617 ADAMTS12P58397 1594 aa36.86■■■■□ 3.49
RNASEH2B-201ENST00000336617 CUL7Q14999 1698 aa36.84■■■■□ 3.49
RNASEH2B-201ENST00000336617 CARMIL1Q5VZK9 1371 aa36.8■■■■□ 3.48
RNASEH2B-201ENST00000336617 PRXQ9BXM0 1461 aa36.79■■■■□ 3.48
RNASEH2B-201ENST00000336617 FHAD1B1AJZ9 1412 aa36.79■■■■□ 3.48
RNASEH2B-201ENST00000336617 SYNJ2O15056 1496 aa36.74■■■■□ 3.47
RNASEH2B-201ENST00000336617 RAPGEF2Q9Y4G8 1499 aa36.67■■■■□ 3.46
RNASEH2B-201ENST00000336617 KIF21BO75037 1637 aa36.67■■■■□ 3.46
RNASEH2B-201ENST00000336617 CHD1O14646 1710 aa36.63■■■■□ 3.46
RNASEH2B-201ENST00000336617 CHMP7Q8WUX9 453 aaPredicted RBP36.62■■■■□ 3.45
RNASEH2B-201ENST00000336617 GRIN2AQ12879 1464 aa36.62■■■■□ 3.45
RNASEH2B-201ENST00000336617 FBLN2P98095 1184 aa36.6■■■■□ 3.45
RNASEH2B-201ENST00000336617 EHMT2Q96KQ7 1210 aa36.51■■■■□ 3.43
RNASEH2B-201ENST00000336617 GOLGA3Q08378 1498 aa36.5■■■■□ 3.43
RNASEH2B-201ENST00000336617 CEP170Q5SW79 1584 aa36.45■■■■□ 3.42
RNASEH2B-201ENST00000336617 NUP160Q12769 1436 aa36.44■■■■□ 3.42
RNASEH2B-201ENST00000336617 LOC105371045A0A1W2PR82 267 aa36.41■■■■□ 3.42
RNASEH2B-201ENST00000336617 UBTFP17480 764 aaKnown RBP36.3■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms