RNA–Protein interactions for RNA: ENST00000453034.5

RAPH1-210, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-210ENST00000453034 NISCHQ9Y2I1 1504 aa44.48■■■■■ 4.71
RAPH1-210ENST00000453034 CCDC180Q9P1Z9 1646 aa37.84■■■■□ 3.65
RAPH1-210ENST00000453034 SHROOM4Q9ULL8 1493 aa37.8■■■■□ 3.64
RAPH1-210ENST00000453034 ZCCHC6Q5VYS8 1495 aaKnown RBP37.67■■■■□ 3.62
RAPH1-210ENST00000453034 SUPT5HO00267 1087 aaKnown RBP37.08■■■■□ 3.53
RAPH1-210ENST00000453034 DCAF8L2P0C7V8 631 aa36.57■■■■□ 3.44
RAPH1-210ENST00000453034 DCAF1Q9Y4B6 1507 aa36.56■■■■□ 3.44
RAPH1-210ENST00000453034 CHIC1Q5VXU3 224 aa36.21■■■■□ 3.39
RAPH1-210ENST00000453034 MYO15BQ96JP2 1530 aa36.15■■■■□ 3.38
RAPH1-210ENST00000453034 ABCC9O60706 1549 aa35.57■■■■□ 3.29
RAPH1-210ENST00000453034 SCRIBQ14160 1630 aa35.37■■■■□ 3.25
RAPH1-210ENST00000453034 HRCP23327 699 aa35.23■■■■□ 3.23
RAPH1-210ENST00000453034 RSF1Q96T23 1441 aaPredicted RBP35.21■■■■□ 3.23
RAPH1-210ENST00000453034 PCGF6Q9BYE7 350 aa35.09■■■■□ 3.21
RAPH1-210ENST00000453034 LOC105371045A0A1W2PR82 267 aa35.08■■■■□ 3.21
RAPH1-210ENST00000453034 NACADO15069 1562 aa34.91■■■■□ 3.18
RAPH1-210ENST00000453034 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
RAPH1-210ENST00000453034 CECR2Q9BXF3 1484 aa34.65■■■■□ 3.14
RAPH1-210ENST00000453034 TRIM41Q8WV44 630 aa34.57■■■■□ 3.13
RAPH1-210ENST00000453034 MROH2BQ7Z745 1585 aa34.56■■■■□ 3.12
RAPH1-210ENST00000453034 TRIM26Q12899 539 aaPredicted RBP34.47■■■■□ 3.11
RAPH1-210ENST00000453034 PPARGC1BQ86YN6 1023 aaKnown RBP34.42■■■■□ 3.1
RAPH1-210ENST00000453034 WIZO95785 1651 aa34.39■■■■□ 3.1
RAPH1-210ENST00000453034 FAM9AQ8IZU1 332 aaPredicted RBP34.23■■■■□ 3.07
RAPH1-210ENST00000453034 BAZ1AQ9NRL2 1556 aaPredicted RBP34.23■■■■□ 3.07
RAPH1-210ENST00000453034 EIF4G1Q04637 1599 aaKnown RBP34.07■■■■□ 3.04
RAPH1-210ENST00000453034 UNC13AQ9UPW8 1703 aa33.88■■■■□ 3.01
RAPH1-210ENST00000453034 TOP2AP11388 1531 aaKnown RBP33.87■■■■□ 3.01
RAPH1-210ENST00000453034 SMARCA4P51532 1647 aa33.87■■■■□ 3.01
RAPH1-210ENST00000453034 EHMT2Q96KQ7 1210 aa33.87■■■■□ 3.01
RAPH1-210ENST00000453034 ZEB1P37275 1124 aaPredicted RBP33.74■■■□□ 2.99
RAPH1-210ENST00000453034 SMARCA2P51531 1590 aa33.7■■■□□ 2.99
RAPH1-210ENST00000453034 CCDC88BA6NC98 1476 aa33.69■■■□□ 2.98
RAPH1-210ENST00000453034 ABCC8Q09428 1581 aa33.62■■■□□ 2.97
RAPH1-210ENST00000453034 BICRAQ9NZM4 1560 aa33.42■■■□□ 2.94
RAPH1-210ENST00000453034 SOGA1O94964 1423 aa33.31■■■□□ 2.92
RAPH1-210ENST00000453034 PEG3Q9GZU2 1588 aa33.27■■■□□ 2.92
RAPH1-210ENST00000453034 WRNQ14191 1432 aaPredicted RBP eCLIP33.26■■■□□ 2.91
RAPH1-210ENST00000453034 PABPN1Q86U42 306 aaKnown RBP eCLIP33.25■■■□□ 2.91
RAPH1-210ENST00000453034 CEP162Q5TB80 1403 aa33.21■■■□□ 2.91
RAPH1-210ENST00000453034 EEA1Q15075 1411 aa33.2■■■□□ 2.91
RAPH1-210ENST00000453034 TNIKQ9UKE5 1360 aa33.16■■■□□ 2.9
RAPH1-210ENST00000453034 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
RAPH1-210ENST00000453034 CSRNP3Q8WYN3 585 aa33.09■■■□□ 2.89
RAPH1-210ENST00000453034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.02■■■□□ 2.88
RAPH1-210ENST00000453034 GOLGA3Q08378 1498 aa32.96■■■□□ 2.87
RAPH1-210ENST00000453034 ATAD2BQ9ULI0 1458 aa32.94■■■□□ 2.86
RAPH1-210ENST00000453034 SYNJ1O43426 1573 aa32.93■■■□□ 2.86
RAPH1-210ENST00000453034 CCER1Q8TC90 406 aaPredicted RBP32.92■■■□□ 2.86
RAPH1-210ENST00000453034 UBTFP17480 764 aaKnown RBP32.89■■■□□ 2.86
RAPH1-210ENST00000453034 BAZ1BQ9UIG0 1483 aaKnown RBP32.83■■■□□ 2.85
RAPH1-210ENST00000453034 TTBK1Q5TCY1 1321 aaPredicted RBP32.82■■■□□ 2.85
RAPH1-210ENST00000453034 KIF21BO75037 1637 aa32.79■■■□□ 2.84
RAPH1-210ENST00000453034 CEP164Q9UPV0 1460 aa32.77■■■□□ 2.84
RAPH1-210ENST00000453034 CLIP1P30622 1438 aa32.56■■■□□ 2.8
RAPH1-210ENST00000453034 TOP2BQ02880 1626 aa32.54■■■□□ 2.8
RAPH1-210ENST00000453034 RAPGEF2Q9Y4G8 1499 aa32.51■■■□□ 2.8
RAPH1-210ENST00000453034 SCAF1Q9H7N4 1312 aaKnown RBP32.49■■■□□ 2.79
RAPH1-210ENST00000453034 VPS8Q8N3P4 1428 aa32.46■■■□□ 2.79
RAPH1-210ENST00000453034 BIVM-ERCC5R4GMW8 1640 aa32.44■■■□□ 2.78
RAPH1-210ENST00000453034 DIEXFQ68CQ4 756 aaKnown RBP32.35■■■□□ 2.77
RAPH1-210ENST00000453034 HMGXB3Q12766 1538 aa32.34■■■□□ 2.77
RAPH1-210ENST00000453034 NCAPD3P42695 1498 aa32.3■■■□□ 2.76
RAPH1-210ENST00000453034 ERICH3Q5RHP9 1530 aa32.25■■■□□ 2.75
RAPH1-210ENST00000453034 PRXQ9BXM0 1461 aa32.23■■■□□ 2.75
RAPH1-210ENST00000453034 HNRNPUL2Q1KMD3 747 aaKnown RBP32.21■■■□□ 2.75
RAPH1-210ENST00000453034 CUX1P39880 1505 aa32.18■■■□□ 2.74
RAPH1-210ENST00000453034 ACIN1Q9UKV3 1341 aaKnown RBP32.16■■■□□ 2.74
RAPH1-210ENST00000453034 APLP2Q06481 763 aa32.15■■■□□ 2.74
RAPH1-210ENST00000453034 RANGAP1P46060 587 aaPredicted RBP32.13■■■□□ 2.73
RAPH1-210ENST00000453034 ZNF316A6NFI3 1004 aaPredicted RBP32.12■■■□□ 2.73
RAPH1-210ENST00000453034 NEUROD1Q13562 356 aa32.11■■■□□ 2.73
RAPH1-210ENST00000453034 ARAP1Q96P48 1450 aa32.08■■■□□ 2.73
RAPH1-210ENST00000453034 CFTRP13569 1480 aa32.07■■■□□ 2.72
RAPH1-210ENST00000453034 KIF27Q86VH2 1401 aa32■■■□□ 2.71
RAPH1-210ENST00000453034 CENPBP07199 599 aaPredicted RBP31.92■■■□□ 2.7
RAPH1-210ENST00000453034 PRDM2Q13029 1718 aa31.89■■■□□ 2.7
RAPH1-210ENST00000453034 PELP1Q8IZL8 1130 aaKnown RBP31.86■■■□□ 2.69
RAPH1-210ENST00000453034 KANK4Q5T7N3 995 aaPredicted RBP31.84■■■□□ 2.69
RAPH1-210ENST00000453034 ARHGAP35Q9NRY4 1499 aa31.78■■■□□ 2.68
RAPH1-210ENST00000453034 GTF3C3Q9Y5Q9 886 aa31.75■■■□□ 2.67
RAPH1-210ENST00000453034 RRBP1Q9P2E9 1410 aaKnown RBP31.75■■■□□ 2.67
RAPH1-210ENST00000453034 DHX57Q6P158 1386 aaKnown RBP31.72■■■□□ 2.67
RAPH1-210ENST00000453034 CLSPNQ9HAW4 1339 aa31.72■■■□□ 2.67
RAPH1-210ENST00000453034 CUX2O14529 1486 aa31.67■■■□□ 2.66
RAPH1-210ENST00000453034 MIER1Q8N108 512 aa31.66■■■□□ 2.66
RAPH1-210ENST00000453034 IGF1RP08069 1367 aa31.66■■■□□ 2.66
RAPH1-210ENST00000453034 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
RAPH1-210ENST00000453034 FGD5Q6ZNL6 1462 aa31.56■■■□□ 2.64
RAPH1-210ENST00000453034 CCNB3Q8WWL7 1395 aa31.55■■■□□ 2.64
RAPH1-210ENST00000453034 YTHDC1Q96MU7 727 aaKnown RBP31.51■■■□□ 2.63
RAPH1-210ENST00000453034 CARMIL1Q5VZK9 1371 aa31.5■■■□□ 2.63
RAPH1-210ENST00000453034 MAP3K1Q13233 1512 aa31.47■■■□□ 2.63
RAPH1-210ENST00000453034 TIAM1Q13009 1591 aa31.47■■■□□ 2.63
RAPH1-210ENST00000453034 CC2D2AQ9P2K1 1620 aa31.43■■■□□ 2.62
RAPH1-210ENST00000453034 FANCD2Q9BXW9 1451 aa31.35■■■□□ 2.61
RAPH1-210ENST00000453034 LRRC9Q6ZRR7 1453 aa31.33■■■□□ 2.61
RAPH1-210ENST00000453034 ITGAEP38570 1179 aa31.29■■■□□ 2.6
RAPH1-210ENST00000453034 RAB3GAP2Q9H2M9 1393 aa31.27■■■□□ 2.6
RAPH1-210ENST00000453034 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms