Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SETD8P1-201ENST00000623146 1180 ntBASIC27.13■■□□□ 1.93
PCDHGA4Q9Y5G9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHGA4Q9Y5G9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.12■■□□□ 1.93
PCDHGA4Q9Y5G9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGA4Q9Y5G9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGA4Q9Y5G9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHGA4Q9Y5G9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGA4Q9Y5G9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.05■■□□□ 1.92
PCDHGA4Q9Y5G9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
PCDHGA4Q9Y5G9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGA4Q9Y5G9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGA4Q9Y5G9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHGA4Q9Y5G9 SUZ12P1-203ENST00000578195 985 ntBASIC27.03■■□□□ 1.92
PCDHGA4Q9Y5G9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHGA4Q9Y5G9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHGA4Q9Y5G9 MVK-208ENST00000539696 608 ntTSL 5 BASIC27■■□□□ 1.91
PCDHGA4Q9Y5G9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27■■□□□ 1.91
PCDHGA4Q9Y5G9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27■■□□□ 1.91
PCDHGA4Q9Y5G9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHGA4Q9Y5G9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.99■■□□□ 1.91
PCDHGA4Q9Y5G9 RPS2P35-201ENST00000443417 897 ntBASIC26.98■■□□□ 1.91
PCDHGA4Q9Y5G9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
PCDHGA4Q9Y5G9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGA4Q9Y5G9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
PCDHGA4Q9Y5G9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PCDHGA4Q9Y5G9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDHGA4Q9Y5G9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.95■■□□□ 1.9
PCDHGA4Q9Y5G9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA4Q9Y5G9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA4Q9Y5G9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA4Q9Y5G9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA4Q9Y5G9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA4Q9Y5G9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGA4Q9Y5G9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.92■■□□□ 1.9
PCDHGA4Q9Y5G9 AC139426.1-201ENST00000568218 2529 ntBASIC26.91■■□□□ 1.9
PCDHGA4Q9Y5G9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDHGA4Q9Y5G9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.91■■□□□ 1.9
PCDHGA4Q9Y5G9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHGA4Q9Y5G9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHGA4Q9Y5G9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHGA4Q9Y5G9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.89■■□□□ 1.9
PCDHGA4Q9Y5G9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.89■■□□□ 1.9
PCDHGA4Q9Y5G9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHGA4Q9Y5G9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGA4Q9Y5G9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
PCDHGA4Q9Y5G9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA4Q9Y5G9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGA4Q9Y5G9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHGA4Q9Y5G9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.86■■□□□ 1.89
PCDHGA4Q9Y5G9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHGA4Q9Y5G9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDHGA4Q9Y5G9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
PCDHGA4Q9Y5G9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDHGA4Q9Y5G9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDHGA4Q9Y5G9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
PCDHGA4Q9Y5G9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHGA4Q9Y5G9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHGA4Q9Y5G9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
PCDHGA4Q9Y5G9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGA4Q9Y5G9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGA4Q9Y5G9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGA4Q9Y5G9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGA4Q9Y5G9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHGA4Q9Y5G9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
PCDHGA4Q9Y5G9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.71■■□□□ 1.87
PCDHGA4Q9Y5G9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGA4Q9Y5G9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGA4Q9Y5G9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
PCDHGA4Q9Y5G9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGA4Q9Y5G9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHGA4Q9Y5G9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDHGA4Q9Y5G9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGA4Q9Y5G9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGA4Q9Y5G9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGA4Q9Y5G9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA4Q9Y5G9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA4Q9Y5G9 CAHM-201ENST00000604200 896 ntBASIC26.62■■□□□ 1.85
PCDHGA4Q9Y5G9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
PCDHGA4Q9Y5G9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA4Q9Y5G9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA4Q9Y5G9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGA4Q9Y5G9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGA4Q9Y5G9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHGA4Q9Y5G9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
PCDHGA4Q9Y5G9 AL162393.1-201ENST00000437852 946 ntBASIC26.59■■□□□ 1.85
PCDHGA4Q9Y5G9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHGA4Q9Y5G9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHGA4Q9Y5G9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
PCDHGA4Q9Y5G9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.57■■□□□ 1.84
PCDHGA4Q9Y5G9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.56■■□□□ 1.84
PCDHGA4Q9Y5G9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHGA4Q9Y5G9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHGA4Q9Y5G9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHGA4Q9Y5G9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGA4Q9Y5G9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGA4Q9Y5G9 AP006261.1-201ENST00000584783 668 ntBASIC26.54■■□□□ 1.84
PCDHGA4Q9Y5G9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA4Q9Y5G9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.53■■□□□ 1.84
PCDHGA4Q9Y5G9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGA4Q9Y5G9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms