Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CSDC2Q9Y534 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSDC2Q9Y534 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CSDC2Q9Y534 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CSDC2Q9Y534 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSDC2Q9Y534 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSDC2Q9Y534 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CSDC2Q9Y534 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.22■□□□□ 0.67
CSDC2Q9Y534 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.22■□□□□ 0.67
CSDC2Q9Y534 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSDC2Q9Y534 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSDC2Q9Y534 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.2■□□□□ 0.66
CSDC2Q9Y534 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSDC2Q9Y534 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSDC2Q9Y534 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.17■□□□□ 0.66
CSDC2Q9Y534 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.17■□□□□ 0.66
CSDC2Q9Y534 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSDC2Q9Y534 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSDC2Q9Y534 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.14■□□□□ 0.65
CSDC2Q9Y534 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.13■□□□□ 0.65
CSDC2Q9Y534 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSDC2Q9Y534 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSDC2Q9Y534 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.11■□□□□ 0.65
CSDC2Q9Y534 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSDC2Q9Y534 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSDC2Q9Y534 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.1■□□□□ 0.65
CSDC2Q9Y534 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSDC2Q9Y534 AC120057.4-201ENST00000624722 1615 ntBASIC19.09■□□□□ 0.65
CSDC2Q9Y534 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CSDC2Q9Y534 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSDC2Q9Y534 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSDC2Q9Y534 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSDC2Q9Y534 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSDC2Q9Y534 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSDC2Q9Y534 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.03■□□□□ 0.64
CSDC2Q9Y534 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.02■□□□□ 0.64
CSDC2Q9Y534 AC139426.1-201ENST00000568218 2529 ntBASIC19.02■□□□□ 0.64
CSDC2Q9Y534 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CSDC2Q9Y534 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.02■□□□□ 0.64
CSDC2Q9Y534 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CSDC2Q9Y534 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSDC2Q9Y534 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19■□□□□ 0.63
CSDC2Q9Y534 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19■□□□□ 0.63
CSDC2Q9Y534 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSDC2Q9Y534 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSDC2Q9Y534 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CSDC2Q9Y534 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.99■□□□□ 0.63
CSDC2Q9Y534 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSDC2Q9Y534 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSDC2Q9Y534 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSDC2Q9Y534 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.98■□□□□ 0.63
CSDC2Q9Y534 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSDC2Q9Y534 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.97■□□□□ 0.63
CSDC2Q9Y534 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.95■□□□□ 0.62
CSDC2Q9Y534 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.94■□□□□ 0.62
CSDC2Q9Y534 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CSDC2Q9Y534 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CSDC2Q9Y534 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSDC2Q9Y534 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSDC2Q9Y534 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSDC2Q9Y534 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.91■□□□□ 0.62
CSDC2Q9Y534 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSDC2Q9Y534 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSDC2Q9Y534 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSDC2Q9Y534 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSDC2Q9Y534 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSDC2Q9Y534 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CSDC2Q9Y534 ABCB10P1-201ENST00000614297 2181 ntBASIC18.89■□□□□ 0.62
CSDC2Q9Y534 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSDC2Q9Y534 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSDC2Q9Y534 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CSDC2Q9Y534 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSDC2Q9Y534 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSDC2Q9Y534 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSDC2Q9Y534 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.88■□□□□ 0.61
CSDC2Q9Y534 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CSDC2Q9Y534 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSDC2Q9Y534 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSDC2Q9Y534 AC006077.2-201ENST00000623591 457 ntBASIC18.87■□□□□ 0.61
CSDC2Q9Y534 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSDC2Q9Y534 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSDC2Q9Y534 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CSDC2Q9Y534 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSDC2Q9Y534 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSDC2Q9Y534 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSDC2Q9Y534 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.81■□□□□ 0.6
CSDC2Q9Y534 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSDC2Q9Y534 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSDC2Q9Y534 ABCB10P3-201ENST00000561950 2166 ntBASIC18.79■□□□□ 0.6
CSDC2Q9Y534 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSDC2Q9Y534 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.79■□□□□ 0.6
CSDC2Q9Y534 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CSDC2Q9Y534 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSDC2Q9Y534 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSDC2Q9Y534 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSDC2Q9Y534 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSDC2Q9Y534 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.76■□□□□ 0.59
CSDC2Q9Y534 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.76■□□□□ 0.59
CSDC2Q9Y534 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CSDC2Q9Y534 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms