Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDH18Q9HCL0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.91■■■□□ 2.22
PCDH18Q9HCL0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PCDH18Q9HCL0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
PCDH18Q9HCL0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PCDH18Q9HCL0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.87■■■□□ 2.21
PCDH18Q9HCL0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDH18Q9HCL0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDH18Q9HCL0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.85■■■□□ 2.21
PCDH18Q9HCL0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PCDH18Q9HCL0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDH18Q9HCL0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDH18Q9HCL0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCDH18Q9HCL0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.8■■■□□ 2.2
PCDH18Q9HCL0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PCDH18Q9HCL0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.77■■■□□ 2.2
PCDH18Q9HCL0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
PCDH18Q9HCL0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PCDH18Q9HCL0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.76■■■□□ 2.19
PCDH18Q9HCL0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.76■■■□□ 2.19
PCDH18Q9HCL0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
PCDH18Q9HCL0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
PCDH18Q9HCL0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PCDH18Q9HCL0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PCDH18Q9HCL0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
PCDH18Q9HCL0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCDH18Q9HCL0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
PCDH18Q9HCL0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
PCDH18Q9HCL0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.71■■■□□ 2.19
PCDH18Q9HCL0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PCDH18Q9HCL0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.69■■■□□ 2.18
PCDH18Q9HCL0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
PCDH18Q9HCL0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCDH18Q9HCL0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
PCDH18Q9HCL0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.65■■■□□ 2.18
PCDH18Q9HCL0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
PCDH18Q9HCL0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PCDH18Q9HCL0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
PCDH18Q9HCL0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.63■■■□□ 2.17
PCDH18Q9HCL0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.62■■■□□ 2.17
PCDH18Q9HCL0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH18Q9HCL0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDH18Q9HCL0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.6■■■□□ 2.17
PCDH18Q9HCL0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCDH18Q9HCL0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDH18Q9HCL0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.6■■■□□ 2.17
PCDH18Q9HCL0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.6■■■□□ 2.17
PCDH18Q9HCL0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDH18Q9HCL0 AC120057.4-201ENST00000624722 1615 ntBASIC28.59■■■□□ 2.17
PCDH18Q9HCL0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
PCDH18Q9HCL0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.58■■■□□ 2.17
PCDH18Q9HCL0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.57■■■□□ 2.16
PCDH18Q9HCL0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDH18Q9HCL0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDH18Q9HCL0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCDH18Q9HCL0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.54■■■□□ 2.16
PCDH18Q9HCL0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDH18Q9HCL0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.53■■■□□ 2.16
PCDH18Q9HCL0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDH18Q9HCL0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.51■■■□□ 2.15
PCDH18Q9HCL0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
PCDH18Q9HCL0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDH18Q9HCL0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDH18Q9HCL0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.49■■■□□ 2.15
PCDH18Q9HCL0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PCDH18Q9HCL0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDH18Q9HCL0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDH18Q9HCL0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDH18Q9HCL0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDH18Q9HCL0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PCDH18Q9HCL0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.45■■■□□ 2.15
PCDH18Q9HCL0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.45■■■□□ 2.15
PCDH18Q9HCL0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDH18Q9HCL0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDH18Q9HCL0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH18Q9HCL0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH18Q9HCL0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDH18Q9HCL0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDH18Q9HCL0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.39■■■□□ 2.14
PCDH18Q9HCL0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDH18Q9HCL0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH18Q9HCL0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH18Q9HCL0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH18Q9HCL0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PCDH18Q9HCL0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PCDH18Q9HCL0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDH18Q9HCL0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDH18Q9HCL0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDH18Q9HCL0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.33■■■□□ 2.13
PCDH18Q9HCL0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.32■■■□□ 2.12
PCDH18Q9HCL0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDH18Q9HCL0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.29■■■□□ 2.12
PCDH18Q9HCL0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.29■■■□□ 2.12
PCDH18Q9HCL0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.29■■■□□ 2.12
PCDH18Q9HCL0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH18Q9HCL0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH18Q9HCL0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH18Q9HCL0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PCDH18Q9HCL0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDH18Q9HCL0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms