Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
VRTNQ9H8Y1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
VRTNQ9H8Y1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.86■■■□□ 2.37
VRTNQ9H8Y1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.84■■■□□ 2.37
VRTNQ9H8Y1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
VRTNQ9H8Y1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.81■■■□□ 2.36
VRTNQ9H8Y1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.81■■■□□ 2.36
VRTNQ9H8Y1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.8■■■□□ 2.36
VRTNQ9H8Y1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.78■■■□□ 2.36
VRTNQ9H8Y1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
VRTNQ9H8Y1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
VRTNQ9H8Y1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.76■■■□□ 2.36
VRTNQ9H8Y1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.76■■■□□ 2.35
VRTNQ9H8Y1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
VRTNQ9H8Y1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
VRTNQ9H8Y1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.74■■■□□ 2.35
VRTNQ9H8Y1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VRTNQ9H8Y1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
VRTNQ9H8Y1 RARRES2P7-201ENST00000567349 469 ntBASIC29.72■■■□□ 2.35
VRTNQ9H8Y1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
VRTNQ9H8Y1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
VRTNQ9H8Y1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.72■■■□□ 2.35
VRTNQ9H8Y1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
VRTNQ9H8Y1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
VRTNQ9H8Y1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.7■■■□□ 2.35
VRTNQ9H8Y1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
VRTNQ9H8Y1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
VRTNQ9H8Y1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
VRTNQ9H8Y1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.68■■■□□ 2.34
VRTNQ9H8Y1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
VRTNQ9H8Y1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
VRTNQ9H8Y1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.65■■■□□ 2.34
VRTNQ9H8Y1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VRTNQ9H8Y1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
VRTNQ9H8Y1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
VRTNQ9H8Y1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
VRTNQ9H8Y1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VRTNQ9H8Y1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
VRTNQ9H8Y1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
VRTNQ9H8Y1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VRTNQ9H8Y1 SETD8P1-201ENST00000623146 1180 ntBASIC29.59■■■□□ 2.33
VRTNQ9H8Y1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
VRTNQ9H8Y1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
VRTNQ9H8Y1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.56■■■□□ 2.32
VRTNQ9H8Y1 AL133380.1-201ENST00000506013 324 ntBASIC29.55■■■□□ 2.32
VRTNQ9H8Y1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.55■■■□□ 2.32
VRTNQ9H8Y1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
VRTNQ9H8Y1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
VRTNQ9H8Y1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
VRTNQ9H8Y1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
VRTNQ9H8Y1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.48■■■□□ 2.31
VRTNQ9H8Y1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VRTNQ9H8Y1 AC136428.2-201ENST00000563187 214 ntBASIC29.46■■■□□ 2.31
VRTNQ9H8Y1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.45■■■□□ 2.31
VRTNQ9H8Y1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
VRTNQ9H8Y1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.45■■■□□ 2.3
VRTNQ9H8Y1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
VRTNQ9H8Y1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
VRTNQ9H8Y1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
VRTNQ9H8Y1 AC097358.2-201ENST00000607541 1159 ntBASIC29.41■■■□□ 2.3
VRTNQ9H8Y1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
VRTNQ9H8Y1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
VRTNQ9H8Y1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
VRTNQ9H8Y1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.38■■■□□ 2.29
VRTNQ9H8Y1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
VRTNQ9H8Y1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
VRTNQ9H8Y1 AC120057.4-201ENST00000624722 1615 ntBASIC29.38■■■□□ 2.29
VRTNQ9H8Y1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
VRTNQ9H8Y1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
VRTNQ9H8Y1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.36■■■□□ 2.29
VRTNQ9H8Y1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.35■■■□□ 2.29
VRTNQ9H8Y1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.35■■■□□ 2.29
VRTNQ9H8Y1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
VRTNQ9H8Y1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
VRTNQ9H8Y1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
VRTNQ9H8Y1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
VRTNQ9H8Y1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.31■■■□□ 2.28
VRTNQ9H8Y1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.3■■■□□ 2.28
VRTNQ9H8Y1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
VRTNQ9H8Y1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.3■■■□□ 2.28
VRTNQ9H8Y1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.29■■■□□ 2.28
VRTNQ9H8Y1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
VRTNQ9H8Y1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
VRTNQ9H8Y1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
VRTNQ9H8Y1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
VRTNQ9H8Y1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
VRTNQ9H8Y1 CAHM-201ENST00000604200 896 ntBASIC29.26■■■□□ 2.27
VRTNQ9H8Y1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
VRTNQ9H8Y1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.26■■■□□ 2.27
VRTNQ9H8Y1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
VRTNQ9H8Y1 WASH5P-204ENST00000632292 975 ntBASIC29.24■■■□□ 2.27
VRTNQ9H8Y1 AL391121.1-201ENST00000607967 1349 ntBASIC29.22■■■□□ 2.27
VRTNQ9H8Y1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
VRTNQ9H8Y1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.22■■■□□ 2.27
VRTNQ9H8Y1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
VRTNQ9H8Y1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.21■■■□□ 2.27
VRTNQ9H8Y1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
VRTNQ9H8Y1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
VRTNQ9H8Y1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
VRTNQ9H8Y1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.2■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms