Protein–RNA interactions for Protein: Q9H5V9

CXorf56, UPF0428 protein CXorf56, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf56Q9H5V9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CXorf56Q9H5V9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CXorf56Q9H5V9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.88■■□□□ 1.89
CXorf56Q9H5V9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.86■■□□□ 1.89
CXorf56Q9H5V9 ABCB10P1-201ENST00000614297 2181 ntBASIC26.85■■□□□ 1.89
CXorf56Q9H5V9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CXorf56Q9H5V9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CXorf56Q9H5V9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
CXorf56Q9H5V9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CXorf56Q9H5V9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CXorf56Q9H5V9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CXorf56Q9H5V9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CXorf56Q9H5V9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CXorf56Q9H5V9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CXorf56Q9H5V9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CXorf56Q9H5V9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CXorf56Q9H5V9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CXorf56Q9H5V9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CXorf56Q9H5V9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CXorf56Q9H5V9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
CXorf56Q9H5V9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.74■■□□□ 1.87
CXorf56Q9H5V9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CXorf56Q9H5V9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
CXorf56Q9H5V9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CXorf56Q9H5V9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CXorf56Q9H5V9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CXorf56Q9H5V9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CXorf56Q9H5V9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CXorf56Q9H5V9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CXorf56Q9H5V9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CXorf56Q9H5V9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CXorf56Q9H5V9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CXorf56Q9H5V9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CXorf56Q9H5V9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.64■■□□□ 1.86
CXorf56Q9H5V9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CXorf56Q9H5V9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.63■■□□□ 1.85
CXorf56Q9H5V9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CXorf56Q9H5V9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CXorf56Q9H5V9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CXorf56Q9H5V9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CXorf56Q9H5V9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CXorf56Q9H5V9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.59■■□□□ 1.85
CXorf56Q9H5V9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CXorf56Q9H5V9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
CXorf56Q9H5V9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CXorf56Q9H5V9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.55■■□□□ 1.84
CXorf56Q9H5V9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.54■■□□□ 1.84
CXorf56Q9H5V9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CXorf56Q9H5V9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CXorf56Q9H5V9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CXorf56Q9H5V9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
CXorf56Q9H5V9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CXorf56Q9H5V9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CXorf56Q9H5V9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
CXorf56Q9H5V9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CXorf56Q9H5V9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CXorf56Q9H5V9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CXorf56Q9H5V9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
CXorf56Q9H5V9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CXorf56Q9H5V9 AC006077.2-201ENST00000623591 457 ntBASIC26.42■■□□□ 1.82
CXorf56Q9H5V9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
CXorf56Q9H5V9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CXorf56Q9H5V9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.39■■□□□ 1.82
CXorf56Q9H5V9 ZNRF2P1-201ENST00000441407 443 ntBASIC26.38■■□□□ 1.81
CXorf56Q9H5V9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CXorf56Q9H5V9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.37■■□□□ 1.81
CXorf56Q9H5V9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CXorf56Q9H5V9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
CXorf56Q9H5V9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CXorf56Q9H5V9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CXorf56Q9H5V9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CXorf56Q9H5V9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.33■■□□□ 1.81
CXorf56Q9H5V9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.32■■□□□ 1.8
CXorf56Q9H5V9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.32■■□□□ 1.8
CXorf56Q9H5V9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CXorf56Q9H5V9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CXorf56Q9H5V9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CXorf56Q9H5V9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CXorf56Q9H5V9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.29■■□□□ 1.8
CXorf56Q9H5V9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CXorf56Q9H5V9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.29■■□□□ 1.8
CXorf56Q9H5V9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CXorf56Q9H5V9 AC015813.7-201ENST00000623294 581 ntBASIC26.27■■□□□ 1.8
CXorf56Q9H5V9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CXorf56Q9H5V9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CXorf56Q9H5V9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CXorf56Q9H5V9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CXorf56Q9H5V9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CXorf56Q9H5V9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CXorf56Q9H5V9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.23■■□□□ 1.79
CXorf56Q9H5V9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CXorf56Q9H5V9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CXorf56Q9H5V9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.2■■□□□ 1.78
CXorf56Q9H5V9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CXorf56Q9H5V9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CXorf56Q9H5V9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.18■■□□□ 1.78
CXorf56Q9H5V9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CXorf56Q9H5V9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CXorf56Q9H5V9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CXorf56Q9H5V9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms