Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.18■□□□□ 0.98
MS4A6AQ9H2W1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MS4A6AQ9H2W1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A6AQ9H2W1 AL031258.1-201ENST00000623562 325 ntBASIC21.16■□□□□ 0.98
MS4A6AQ9H2W1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MS4A6AQ9H2W1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
MS4A6AQ9H2W1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
MS4A6AQ9H2W1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MS4A6AQ9H2W1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.12■□□□□ 0.97
MS4A6AQ9H2W1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MS4A6AQ9H2W1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.09■□□□□ 0.97
MS4A6AQ9H2W1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A6AQ9H2W1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.08■□□□□ 0.97
MS4A6AQ9H2W1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.08■□□□□ 0.97
MS4A6AQ9H2W1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
MS4A6AQ9H2W1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A6AQ9H2W1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
MS4A6AQ9H2W1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
MS4A6AQ9H2W1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A6AQ9H2W1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A6AQ9H2W1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
MS4A6AQ9H2W1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A6AQ9H2W1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A6AQ9H2W1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A6AQ9H2W1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
MS4A6AQ9H2W1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MS4A6AQ9H2W1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.03■□□□□ 0.96
MS4A6AQ9H2W1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MS4A6AQ9H2W1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MS4A6AQ9H2W1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MS4A6AQ9H2W1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
MS4A6AQ9H2W1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A6AQ9H2W1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A6AQ9H2W1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A6AQ9H2W1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A6AQ9H2W1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MS4A6AQ9H2W1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21■□□□□ 0.95
MS4A6AQ9H2W1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.99■□□□□ 0.95
MS4A6AQ9H2W1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A6AQ9H2W1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A6AQ9H2W1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A6AQ9H2W1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A6AQ9H2W1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.97■□□□□ 0.95
MS4A6AQ9H2W1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A6AQ9H2W1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A6AQ9H2W1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
MS4A6AQ9H2W1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A6AQ9H2W1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.95■□□□□ 0.94
MS4A6AQ9H2W1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A6AQ9H2W1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.91■□□□□ 0.94
MS4A6AQ9H2W1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MS4A6AQ9H2W1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.91■□□□□ 0.94
MS4A6AQ9H2W1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.91■□□□□ 0.94
MS4A6AQ9H2W1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MS4A6AQ9H2W1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.9■□□□□ 0.94
MS4A6AQ9H2W1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MS4A6AQ9H2W1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A6AQ9H2W1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A6AQ9H2W1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A6AQ9H2W1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.87■□□□□ 0.93
MS4A6AQ9H2W1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A6AQ9H2W1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.86■□□□□ 0.93
MS4A6AQ9H2W1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A6AQ9H2W1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A6AQ9H2W1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A6AQ9H2W1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.84■□□□□ 0.93
MS4A6AQ9H2W1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A6AQ9H2W1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.83■□□□□ 0.93
MS4A6AQ9H2W1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A6AQ9H2W1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A6AQ9H2W1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A6AQ9H2W1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A6AQ9H2W1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.82■□□□□ 0.92
MS4A6AQ9H2W1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MS4A6AQ9H2W1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MS4A6AQ9H2W1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.8■□□□□ 0.92
MS4A6AQ9H2W1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MS4A6AQ9H2W1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.79■□□□□ 0.92
MS4A6AQ9H2W1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MS4A6AQ9H2W1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MS4A6AQ9H2W1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.78■□□□□ 0.92
MS4A6AQ9H2W1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.78■□□□□ 0.92
MS4A6AQ9H2W1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.77■□□□□ 0.92
MS4A6AQ9H2W1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MS4A6AQ9H2W1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.75■□□□□ 0.91
MS4A6AQ9H2W1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A6AQ9H2W1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MS4A6AQ9H2W1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
MS4A6AQ9H2W1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
MS4A6AQ9H2W1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.73■□□□□ 0.91
MS4A6AQ9H2W1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.72■□□□□ 0.91
MS4A6AQ9H2W1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.72■□□□□ 0.91
MS4A6AQ9H2W1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MS4A6AQ9H2W1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MS4A6AQ9H2W1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A6AQ9H2W1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A6AQ9H2W1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A6AQ9H2W1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.7■□□□□ 0.9
MS4A6AQ9H2W1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A6AQ9H2W1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms