Protein–RNA interactions for Protein: Q8TDX9

PKD1L1, Polycystic kidney disease protein 1-like 1, humanhuman

Predictions only

Length 2,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L1Q8TDX9 AC087741.3-201ENST00000624270 1347 ntBASIC21.83■■□□□ 1.09
PKD1L1Q8TDX9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PKD1L1Q8TDX9 AC145285.7-201ENST00000614819 1539 ntBASIC21.83■■□□□ 1.09
PKD1L1Q8TDX9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PKD1L1Q8TDX9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PKD1L1Q8TDX9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.82■■□□□ 1.08
PKD1L1Q8TDX9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.81■■□□□ 1.08
PKD1L1Q8TDX9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PKD1L1Q8TDX9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.79■■□□□ 1.08
PKD1L1Q8TDX9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PKD1L1Q8TDX9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PKD1L1Q8TDX9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PKD1L1Q8TDX9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.76■■□□□ 1.07
PKD1L1Q8TDX9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PKD1L1Q8TDX9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.76■■□□□ 1.07
PKD1L1Q8TDX9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PKD1L1Q8TDX9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.75■■□□□ 1.07
PKD1L1Q8TDX9 DUX4L28-201ENST00000623687 678 ntBASIC21.74■■□□□ 1.07
PKD1L1Q8TDX9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.73■■□□□ 1.07
PKD1L1Q8TDX9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PKD1L1Q8TDX9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.71■■□□□ 1.07
PKD1L1Q8TDX9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PKD1L1Q8TDX9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PKD1L1Q8TDX9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PKD1L1Q8TDX9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.68■■□□□ 1.06
PKD1L1Q8TDX9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
PKD1L1Q8TDX9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PKD1L1Q8TDX9 AC044849.2-201ENST00000606596 710 ntBASIC21.67■■□□□ 1.06
PKD1L1Q8TDX9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.64■■□□□ 1.05
PKD1L1Q8TDX9 MIR4449-201ENST00000578365 66 ntBASIC21.62■■□□□ 1.05
PKD1L1Q8TDX9 MIR762-201ENST00000390236 83 ntBASIC21.62■■□□□ 1.05
PKD1L1Q8TDX9 AL133380.1-201ENST00000506013 324 ntBASIC21.62■■□□□ 1.05
PKD1L1Q8TDX9 AC005559.1-201ENST00000589661 871 ntBASIC21.61■■□□□ 1.05
PKD1L1Q8TDX9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PKD1L1Q8TDX9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.61■■□□□ 1.05
PKD1L1Q8TDX9 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.6■■□□□ 1.05
PKD1L1Q8TDX9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PKD1L1Q8TDX9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.57■■□□□ 1.04
PKD1L1Q8TDX9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
PKD1L1Q8TDX9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.56■■□□□ 1.04
PKD1L1Q8TDX9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
PKD1L1Q8TDX9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
PKD1L1Q8TDX9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PKD1L1Q8TDX9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PKD1L1Q8TDX9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PKD1L1Q8TDX9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.56■■□□□ 1.04
PKD1L1Q8TDX9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PKD1L1Q8TDX9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.55■■□□□ 1.04
PKD1L1Q8TDX9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.55■■□□□ 1.04
PKD1L1Q8TDX9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PKD1L1Q8TDX9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.55■■□□□ 1.04
PKD1L1Q8TDX9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.55■■□□□ 1.04
PKD1L1Q8TDX9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.53■■□□□ 1.04
PKD1L1Q8TDX9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PKD1L1Q8TDX9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PKD1L1Q8TDX9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PKD1L1Q8TDX9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PKD1L1Q8TDX9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.48■■□□□ 1.03
PKD1L1Q8TDX9 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.47■■□□□ 1.03
PKD1L1Q8TDX9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PKD1L1Q8TDX9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PKD1L1Q8TDX9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.46■■□□□ 1.03
PKD1L1Q8TDX9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PKD1L1Q8TDX9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PKD1L1Q8TDX9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.42■■□□□ 1.02
PKD1L1Q8TDX9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PKD1L1Q8TDX9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PKD1L1Q8TDX9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.41■■□□□ 1.02
PKD1L1Q8TDX9 HSD17B1P1-201ENST00000590052 955 ntBASIC21.41■■□□□ 1.02
PKD1L1Q8TDX9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.4■■□□□ 1.02
PKD1L1Q8TDX9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.39■■□□□ 1.02
PKD1L1Q8TDX9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PKD1L1Q8TDX9 MIR639-201ENST00000384974 98 ntBASIC21.39■■□□□ 1.01
PKD1L1Q8TDX9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PKD1L1Q8TDX9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.37■■□□□ 1.01
PKD1L1Q8TDX9 ZNRF2P2-203ENST00000454624 420 ntBASIC21.37■■□□□ 1.01
PKD1L1Q8TDX9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PKD1L1Q8TDX9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.36■■□□□ 1.01
PKD1L1Q8TDX9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PKD1L1Q8TDX9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PKD1L1Q8TDX9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PKD1L1Q8TDX9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.35■■□□□ 1.01
PKD1L1Q8TDX9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PKD1L1Q8TDX9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PKD1L1Q8TDX9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.33■■□□□ 1
PKD1L1Q8TDX9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.33■■□□□ 1
PKD1L1Q8TDX9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.32■■□□□ 1
PKD1L1Q8TDX9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.31■■□□□ 1
PKD1L1Q8TDX9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.3■■□□□ 1
PKD1L1Q8TDX9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.3■■□□□ 1
PKD1L1Q8TDX9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PKD1L1Q8TDX9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PKD1L1Q8TDX9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PKD1L1Q8TDX9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PKD1L1Q8TDX9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.28■■□□□ 1
PKD1L1Q8TDX9 MIR3648-2-201ENST00000581792 180 ntBASIC21.28■■□□□ 1
PKD1L1Q8TDX9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.28■■□□□ 1
PKD1L1Q8TDX9 MIR3648-1-201ENST00000615959 180 ntBASIC21.28■■□□□ 1
PKD1L1Q8TDX9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PKD1L1Q8TDX9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms