Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
NKX2-3Q8TAU0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
NKX2-3Q8TAU0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
NKX2-3Q8TAU0 MVK-208ENST00000539696 608 ntTSL 5 BASIC33.22■■■□□ 2.91
NKX2-3Q8TAU0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.22■■■□□ 2.91
NKX2-3Q8TAU0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.21■■■□□ 2.91
NKX2-3Q8TAU0 AC136428.2-201ENST00000563187 214 ntBASIC33.19■■■□□ 2.9
NKX2-3Q8TAU0 SETD8P1-201ENST00000623146 1180 ntBASIC33.17■■■□□ 2.9
NKX2-3Q8TAU0 SUZ12P1-203ENST00000578195 985 ntBASIC33.16■■■□□ 2.9
NKX2-3Q8TAU0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
NKX2-3Q8TAU0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
NKX2-3Q8TAU0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
NKX2-3Q8TAU0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
NKX2-3Q8TAU0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC33.12■■■□□ 2.89
NKX2-3Q8TAU0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
NKX2-3Q8TAU0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC33.12■■■□□ 2.89
NKX2-3Q8TAU0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
NKX2-3Q8TAU0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
NKX2-3Q8TAU0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.1■■■□□ 2.89
NKX2-3Q8TAU0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
NKX2-3Q8TAU0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
NKX2-3Q8TAU0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC33.04■■■□□ 2.88
NKX2-3Q8TAU0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
NKX2-3Q8TAU0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
NKX2-3Q8TAU0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
NKX2-3Q8TAU0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.98■■■□□ 2.87
NKX2-3Q8TAU0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
NKX2-3Q8TAU0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
NKX2-3Q8TAU0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.97■■■□□ 2.87
NKX2-3Q8TAU0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.97■■■□□ 2.87
NKX2-3Q8TAU0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.96■■■□□ 2.87
NKX2-3Q8TAU0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
NKX2-3Q8TAU0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
NKX2-3Q8TAU0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.93■■■□□ 2.86
NKX2-3Q8TAU0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NKX2-3Q8TAU0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NKX2-3Q8TAU0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.9■■■□□ 2.86
NKX2-3Q8TAU0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
NKX2-3Q8TAU0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
NKX2-3Q8TAU0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.88■■■□□ 2.85
NKX2-3Q8TAU0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
NKX2-3Q8TAU0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
NKX2-3Q8TAU0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.86■■■□□ 2.85
NKX2-3Q8TAU0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.86■■■□□ 2.85
NKX2-3Q8TAU0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.86■■■□□ 2.85
NKX2-3Q8TAU0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.85■■■□□ 2.85
NKX2-3Q8TAU0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.85■■■□□ 2.85
NKX2-3Q8TAU0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.84■■■□□ 2.85
NKX2-3Q8TAU0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
NKX2-3Q8TAU0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
NKX2-3Q8TAU0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
NKX2-3Q8TAU0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
NKX2-3Q8TAU0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
NKX2-3Q8TAU0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
NKX2-3Q8TAU0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
NKX2-3Q8TAU0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.78■■■□□ 2.84
NKX2-3Q8TAU0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
NKX2-3Q8TAU0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
NKX2-3Q8TAU0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.75■■■□□ 2.83
NKX2-3Q8TAU0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
NKX2-3Q8TAU0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
NKX2-3Q8TAU0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
NKX2-3Q8TAU0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
NKX2-3Q8TAU0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
NKX2-3Q8TAU0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
NKX2-3Q8TAU0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.7■■■□□ 2.83
NKX2-3Q8TAU0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NKX2-3Q8TAU0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.68■■■□□ 2.82
NKX2-3Q8TAU0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
NKX2-3Q8TAU0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
NKX2-3Q8TAU0 AP006261.1-201ENST00000584783 668 ntBASIC32.65■■■□□ 2.82
NKX2-3Q8TAU0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
NKX2-3Q8TAU0 AL162393.1-201ENST00000437852 946 ntBASIC32.64■■■□□ 2.82
NKX2-3Q8TAU0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.64■■■□□ 2.82
NKX2-3Q8TAU0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
NKX2-3Q8TAU0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
NKX2-3Q8TAU0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
NKX2-3Q8TAU0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.61■■■□□ 2.81
NKX2-3Q8TAU0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.6■■■□□ 2.81
NKX2-3Q8TAU0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.59■■■□□ 2.81
NKX2-3Q8TAU0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.59■■■□□ 2.81
NKX2-3Q8TAU0 AL133380.1-201ENST00000506013 324 ntBASIC32.58■■■□□ 2.81
NKX2-3Q8TAU0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
NKX2-3Q8TAU0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
NKX2-3Q8TAU0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
NKX2-3Q8TAU0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.54■■■□□ 2.8
NKX2-3Q8TAU0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.51■■■□□ 2.79
NKX2-3Q8TAU0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
NKX2-3Q8TAU0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
NKX2-3Q8TAU0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
NKX2-3Q8TAU0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.49■■■□□ 2.79
NKX2-3Q8TAU0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NKX2-3Q8TAU0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NKX2-3Q8TAU0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
NKX2-3Q8TAU0 CAHM-201ENST00000604200 896 ntBASIC32.46■■■□□ 2.79
NKX2-3Q8TAU0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
NKX2-3Q8TAU0 MIR7108-201ENST00000614319 87 ntBASIC32.45■■■□□ 2.79
NKX2-3Q8TAU0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
NKX2-3Q8TAU0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.78
NKX2-3Q8TAU0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms