Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC44.63■■■■■ 4.73
CFAP43Q8NDM7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC44.63■■■■■ 4.73
CFAP43Q8NDM7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC44.61■■■■■ 4.73
CFAP43Q8NDM7 AL391121.1-201ENST00000607967 1349 ntBASIC44.61■■■■■ 4.73
CFAP43Q8NDM7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC44.6■■■■■ 4.73
CFAP43Q8NDM7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC44.55■■■■■ 4.72
CFAP43Q8NDM7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC44.53■■■■■ 4.72
CFAP43Q8NDM7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC44.5■■■■■ 4.71
CFAP43Q8NDM7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC44.48■■■■■ 4.71
CFAP43Q8NDM7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC44.48■■■■■ 4.71
CFAP43Q8NDM7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC44.47■■■■■ 4.71
CFAP43Q8NDM7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC44.47■■■■■ 4.71
CFAP43Q8NDM7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC44.47■■■■■ 4.71
CFAP43Q8NDM7 MIR7108-201ENST00000614319 87 ntBASIC44.42■■■■■ 4.7
CFAP43Q8NDM7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC44.41■■■■■ 4.7
CFAP43Q8NDM7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC44.41■■■■■ 4.7
CFAP43Q8NDM7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC44.4■■■■■ 4.7
CFAP43Q8NDM7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC44.39■■■■■ 4.7
CFAP43Q8NDM7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC44.37■■■■■ 4.69
CFAP43Q8NDM7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC44.37■■■■■ 4.69
CFAP43Q8NDM7 MVK-208ENST00000539696 608 ntTSL 5 BASIC44.36■■■■■ 4.69
CFAP43Q8NDM7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC44.36■■■■■ 4.69
CFAP43Q8NDM7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC44.35■■■■■ 4.69
CFAP43Q8NDM7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC44.34■■■■■ 4.69
CFAP43Q8NDM7 AL133380.1-201ENST00000506013 324 ntBASIC44.33■■■■■ 4.69
CFAP43Q8NDM7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC44.32■■■■■ 4.69
CFAP43Q8NDM7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC44.32■■■■■ 4.69
CFAP43Q8NDM7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC44.32■■■■■ 4.69
CFAP43Q8NDM7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC44.27■■■■■ 4.68
CFAP43Q8NDM7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC44.27■■■■■ 4.68
CFAP43Q8NDM7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC44.26■■■■■ 4.68
CFAP43Q8NDM7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC44.26■■■■■ 4.68
CFAP43Q8NDM7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC44.23■■■■■ 4.67
CFAP43Q8NDM7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC44.21■■■■■ 4.67
CFAP43Q8NDM7 ABHD17AP4-201ENST00000411545 909 ntBASIC44.21■■■■■ 4.67
CFAP43Q8NDM7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC44.21■■■■■ 4.67
CFAP43Q8NDM7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC44.21■■■■■ 4.67
CFAP43Q8NDM7 HLA-V-202ENST00000446817 847 ntBASIC44.19■■■■■ 4.66
CFAP43Q8NDM7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC44.17■■■■■ 4.66
CFAP43Q8NDM7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC44.16■■■■■ 4.66
CFAP43Q8NDM7 MIR3665-201ENST00000578708 105 ntBASIC44.15■■■■■ 4.66
CFAP43Q8NDM7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC44.14■■■■■ 4.66
CFAP43Q8NDM7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC44.13■■■■■ 4.65
CFAP43Q8NDM7 DUX4L28-201ENST00000623687 678 ntBASIC44.11■■■■■ 4.65
CFAP43Q8NDM7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC44.11■■■■■ 4.65
CFAP43Q8NDM7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC44.1■■■■■ 4.65
CFAP43Q8NDM7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC44.1■■■■■ 4.65
CFAP43Q8NDM7 AC087741.3-201ENST00000624270 1347 ntBASIC44.09■■■■■ 4.65
CFAP43Q8NDM7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC44.08■■■■■ 4.65
CFAP43Q8NDM7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC44.08■■■■■ 4.65
CFAP43Q8NDM7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC44.07■■■■■ 4.65
CFAP43Q8NDM7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC44.07■■■■■ 4.65
CFAP43Q8NDM7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC44.06■■■■■ 4.64
CFAP43Q8NDM7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC44.05■■■■■ 4.64
CFAP43Q8NDM7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC44.05■■■■■ 4.64
CFAP43Q8NDM7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC44.05■■■■■ 4.64
CFAP43Q8NDM7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC44.04■■■■■ 4.64
CFAP43Q8NDM7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC44.04■■■■■ 4.64
CFAP43Q8NDM7 AC044849.2-201ENST00000606596 710 ntBASIC44■■■■■ 4.63
CFAP43Q8NDM7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC43.98■■■■■ 4.63
CFAP43Q8NDM7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC43.98■■■■■ 4.63
CFAP43Q8NDM7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC43.97■■■■■ 4.63
CFAP43Q8NDM7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC43.96■■■■■ 4.63
CFAP43Q8NDM7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC43.95■■■■■ 4.63
CFAP43Q8NDM7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC43.94■■■■■ 4.62
CFAP43Q8NDM7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC43.93■■■■■ 4.62
CFAP43Q8NDM7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC43.93■■■■■ 4.62
CFAP43Q8NDM7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC43.92■■■■■ 4.62
CFAP43Q8NDM7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC43.92■■■■■ 4.62
CFAP43Q8NDM7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC43.91■■■■■ 4.62
CFAP43Q8NDM7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC43.86■■■■■ 4.61
CFAP43Q8NDM7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC43.85■■■■■ 4.61
CFAP43Q8NDM7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC43.82■■■■■ 4.61
CFAP43Q8NDM7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC43.82■■■■■ 4.61
CFAP43Q8NDM7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC43.8■■■■■ 4.6
CFAP43Q8NDM7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC43.79■■■■■ 4.6
CFAP43Q8NDM7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC43.78■■■■■ 4.6
CFAP43Q8NDM7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC43.74■■■■■ 4.59
CFAP43Q8NDM7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC43.72■■■■■ 4.59
CFAP43Q8NDM7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC43.71■■■■■ 4.59
CFAP43Q8NDM7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC43.69■■■■■ 4.58
CFAP43Q8NDM7 AC005559.1-201ENST00000589661 871 ntBASIC43.68■■■■■ 4.58
CFAP43Q8NDM7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC43.68■■■■■ 4.58
CFAP43Q8NDM7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC43.67■■■■■ 4.58
CFAP43Q8NDM7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC43.67■■■■■ 4.58
CFAP43Q8NDM7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC43.66■■■■■ 4.58
CFAP43Q8NDM7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC43.63■■■■■ 4.58
CFAP43Q8NDM7 MIR762-201ENST00000390236 83 ntBASIC43.63■■■■■ 4.58
CFAP43Q8NDM7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC43.63■■■■■ 4.58
CFAP43Q8NDM7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC43.63■■■■■ 4.58
CFAP43Q8NDM7 CHML-205ENST00000638160 705 ntTSL 3 BASIC43.63■■■■■ 4.58
CFAP43Q8NDM7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC43.61■■■■■ 4.57
CFAP43Q8NDM7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC43.6■■■■■ 4.57
CFAP43Q8NDM7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC43.6■■■■■ 4.57
CFAP43Q8NDM7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC43.59■■■■■ 4.57
CFAP43Q8NDM7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC43.58■■■■■ 4.57
CFAP43Q8NDM7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC43.58■■■■■ 4.57
CFAP43Q8NDM7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC43.56■■■■■ 4.56
CFAP43Q8NDM7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC43.54■■■■■ 4.56
CFAP43Q8NDM7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC43.51■■■■■ 4.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms