Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TRAM1L1Q8N609 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRAM1L1Q8N609 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TRAM1L1Q8N609 RARRES2P7-201ENST00000567349 469 ntBASIC27.61■■■□□ 2.01
TRAM1L1Q8N609 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.6■■■□□ 2.01
TRAM1L1Q8N609 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
TRAM1L1Q8N609 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TRAM1L1Q8N609 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.59■■■□□ 2.01
TRAM1L1Q8N609 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
TRAM1L1Q8N609 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.58■■■□□ 2.01
TRAM1L1Q8N609 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
TRAM1L1Q8N609 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.57■■■□□ 2
TRAM1L1Q8N609 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.55■■■□□ 2
TRAM1L1Q8N609 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.55■■■□□ 2
TRAM1L1Q8N609 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
TRAM1L1Q8N609 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TRAM1L1Q8N609 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.52■■■□□ 2
TRAM1L1Q8N609 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.52■■■□□ 2
TRAM1L1Q8N609 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.5■■□□□ 1.99
TRAM1L1Q8N609 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TRAM1L1Q8N609 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TRAM1L1Q8N609 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
TRAM1L1Q8N609 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TRAM1L1Q8N609 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TRAM1L1Q8N609 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.47■■□□□ 1.99
TRAM1L1Q8N609 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
TRAM1L1Q8N609 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRAM1L1Q8N609 SETD8P1-201ENST00000623146 1180 ntBASIC27.46■■□□□ 1.99
TRAM1L1Q8N609 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TRAM1L1Q8N609 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.45■■□□□ 1.98
TRAM1L1Q8N609 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.45■■□□□ 1.98
TRAM1L1Q8N609 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TRAM1L1Q8N609 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRAM1L1Q8N609 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TRAM1L1Q8N609 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRAM1L1Q8N609 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.41■■□□□ 1.98
TRAM1L1Q8N609 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRAM1L1Q8N609 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TRAM1L1Q8N609 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.4■■□□□ 1.98
TRAM1L1Q8N609 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRAM1L1Q8N609 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRAM1L1Q8N609 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRAM1L1Q8N609 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TRAM1L1Q8N609 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRAM1L1Q8N609 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRAM1L1Q8N609 AL133380.1-201ENST00000506013 324 ntBASIC27.35■■□□□ 1.97
TRAM1L1Q8N609 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRAM1L1Q8N609 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRAM1L1Q8N609 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.3■■□□□ 1.96
TRAM1L1Q8N609 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.3■■□□□ 1.96
TRAM1L1Q8N609 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRAM1L1Q8N609 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
TRAM1L1Q8N609 AC097358.2-201ENST00000607541 1159 ntBASIC27.29■■□□□ 1.96
TRAM1L1Q8N609 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.29■■□□□ 1.96
TRAM1L1Q8N609 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRAM1L1Q8N609 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
TRAM1L1Q8N609 AC136428.2-201ENST00000563187 214 ntBASIC27.27■■□□□ 1.96
TRAM1L1Q8N609 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.26■■□□□ 1.95
TRAM1L1Q8N609 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRAM1L1Q8N609 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRAM1L1Q8N609 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRAM1L1Q8N609 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TRAM1L1Q8N609 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.24■■□□□ 1.95
TRAM1L1Q8N609 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.23■■□□□ 1.95
TRAM1L1Q8N609 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRAM1L1Q8N609 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TRAM1L1Q8N609 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRAM1L1Q8N609 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRAM1L1Q8N609 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.17■■□□□ 1.94
TRAM1L1Q8N609 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.17■■□□□ 1.94
TRAM1L1Q8N609 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
TRAM1L1Q8N609 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.17■■□□□ 1.94
TRAM1L1Q8N609 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TRAM1L1Q8N609 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TRAM1L1Q8N609 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TRAM1L1Q8N609 AC120057.4-201ENST00000624722 1615 ntBASIC27.16■■□□□ 1.94
TRAM1L1Q8N609 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.15■■□□□ 1.94
TRAM1L1Q8N609 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.15■■□□□ 1.94
TRAM1L1Q8N609 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TRAM1L1Q8N609 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRAM1L1Q8N609 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.12■■□□□ 1.93
TRAM1L1Q8N609 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRAM1L1Q8N609 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRAM1L1Q8N609 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
TRAM1L1Q8N609 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.1■■□□□ 1.93
TRAM1L1Q8N609 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
TRAM1L1Q8N609 CAHM-201ENST00000604200 896 ntBASIC27.09■■□□□ 1.93
TRAM1L1Q8N609 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TRAM1L1Q8N609 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRAM1L1Q8N609 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
TRAM1L1Q8N609 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TRAM1L1Q8N609 WASH5P-204ENST00000632292 975 ntBASIC27.06■■□□□ 1.92
TRAM1L1Q8N609 AL391121.1-201ENST00000607967 1349 ntBASIC27.06■■□□□ 1.92
TRAM1L1Q8N609 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
TRAM1L1Q8N609 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TRAM1L1Q8N609 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRAM1L1Q8N609 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TRAM1L1Q8N609 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TRAM1L1Q8N609 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.01■■□□□ 1.91
TRAM1L1Q8N609 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms