Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.82■■■□□ 2.36
VPS36Q86VN1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
VPS36Q86VN1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
VPS36Q86VN1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS36Q86VN1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
VPS36Q86VN1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.76■■■□□ 2.35
VPS36Q86VN1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
VPS36Q86VN1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
VPS36Q86VN1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
VPS36Q86VN1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
VPS36Q86VN1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
VPS36Q86VN1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.74■■■□□ 2.35
VPS36Q86VN1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.71■■■□□ 2.35
VPS36Q86VN1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.71■■■□□ 2.35
VPS36Q86VN1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.7■■■□□ 2.35
VPS36Q86VN1 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.7■■■□□ 2.35
VPS36Q86VN1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.7■■■□□ 2.34
VPS36Q86VN1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS36Q86VN1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
VPS36Q86VN1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
VPS36Q86VN1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
VPS36Q86VN1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
VPS36Q86VN1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
VPS36Q86VN1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
VPS36Q86VN1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.67■■■□□ 2.34
VPS36Q86VN1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
VPS36Q86VN1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
VPS36Q86VN1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
VPS36Q86VN1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
VPS36Q86VN1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS36Q86VN1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS36Q86VN1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
VPS36Q86VN1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
VPS36Q86VN1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
VPS36Q86VN1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.59■■■□□ 2.33
VPS36Q86VN1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
VPS36Q86VN1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS36Q86VN1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VPS36Q86VN1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
VPS36Q86VN1 AC120057.4-201ENST00000624722 1615 ntBASIC29.56■■■□□ 2.32
VPS36Q86VN1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
VPS36Q86VN1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
VPS36Q86VN1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.55■■■□□ 2.32
VPS36Q86VN1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.54■■■□□ 2.32
VPS36Q86VN1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
VPS36Q86VN1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
VPS36Q86VN1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.51■■■□□ 2.31
VPS36Q86VN1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
VPS36Q86VN1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.5■■■□□ 2.31
VPS36Q86VN1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
VPS36Q86VN1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.49■■■□□ 2.31
VPS36Q86VN1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.48■■■□□ 2.31
VPS36Q86VN1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
VPS36Q86VN1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS36Q86VN1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
VPS36Q86VN1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
VPS36Q86VN1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.44■■■□□ 2.3
VPS36Q86VN1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
VPS36Q86VN1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.42■■■□□ 2.3
VPS36Q86VN1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
VPS36Q86VN1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
VPS36Q86VN1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.38■■■□□ 2.29
VPS36Q86VN1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.38■■■□□ 2.29
VPS36Q86VN1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
VPS36Q86VN1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
VPS36Q86VN1 DYNLL1-208ENST00000550178 581 ntBASIC29.37■■■□□ 2.29
VPS36Q86VN1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
VPS36Q86VN1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
VPS36Q86VN1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
VPS36Q86VN1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
VPS36Q86VN1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
VPS36Q86VN1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.32■■■□□ 2.28
VPS36Q86VN1 AP002365.1-201ENST00000603448 772 ntBASIC29.31■■■□□ 2.28
VPS36Q86VN1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
VPS36Q86VN1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
VPS36Q86VN1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
VPS36Q86VN1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
VPS36Q86VN1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.28■■■□□ 2.28
VPS36Q86VN1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.28■■■□□ 2.28
VPS36Q86VN1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
VPS36Q86VN1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
VPS36Q86VN1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
VPS36Q86VN1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
VPS36Q86VN1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.24■■■□□ 2.27
VPS36Q86VN1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
VPS36Q86VN1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
VPS36Q86VN1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
VPS36Q86VN1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
VPS36Q86VN1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
VPS36Q86VN1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
VPS36Q86VN1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.17■■■□□ 2.26
VPS36Q86VN1 AL031258.1-201ENST00000623562 325 ntBASIC29.17■■■□□ 2.26
VPS36Q86VN1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS36Q86VN1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.15■■■□□ 2.26
VPS36Q86VN1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
VPS36Q86VN1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.14■■■□□ 2.26
VPS36Q86VN1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
VPS36Q86VN1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
VPS36Q86VN1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.13■■■□□ 2.25
VPS36Q86VN1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms