Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
LRRTM4Q86VH4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
LRRTM4Q86VH4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
LRRTM4Q86VH4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LRRTM4Q86VH4 SETD8P1-201ENST00000623146 1180 ntBASIC27.36■■□□□ 1.97
LRRTM4Q86VH4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.35■■□□□ 1.97
LRRTM4Q86VH4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
LRRTM4Q86VH4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.34■■□□□ 1.97
LRRTM4Q86VH4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.33■■□□□ 1.97
LRRTM4Q86VH4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LRRTM4Q86VH4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LRRTM4Q86VH4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LRRTM4Q86VH4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
LRRTM4Q86VH4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LRRTM4Q86VH4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.28■■□□□ 1.96
LRRTM4Q86VH4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LRRTM4Q86VH4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LRRTM4Q86VH4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
LRRTM4Q86VH4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
LRRTM4Q86VH4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.24■■□□□ 1.95
LRRTM4Q86VH4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LRRTM4Q86VH4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
LRRTM4Q86VH4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LRRTM4Q86VH4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.23■■□□□ 1.95
LRRTM4Q86VH4 AC097358.2-201ENST00000607541 1159 ntBASIC27.23■■□□□ 1.95
LRRTM4Q86VH4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.21■■□□□ 1.95
LRRTM4Q86VH4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LRRTM4Q86VH4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
LRRTM4Q86VH4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LRRTM4Q86VH4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.18■■□□□ 1.94
LRRTM4Q86VH4 AL133380.1-201ENST00000506013 324 ntBASIC27.17■■□□□ 1.94
LRRTM4Q86VH4 AC136428.2-201ENST00000563187 214 ntBASIC27.17■■□□□ 1.94
LRRTM4Q86VH4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
LRRTM4Q86VH4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.16■■□□□ 1.94
LRRTM4Q86VH4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LRRTM4Q86VH4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
LRRTM4Q86VH4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LRRTM4Q86VH4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.14■■□□□ 1.94
LRRTM4Q86VH4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
LRRTM4Q86VH4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.13■■□□□ 1.93
LRRTM4Q86VH4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.13■■□□□ 1.93
LRRTM4Q86VH4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LRRTM4Q86VH4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
LRRTM4Q86VH4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.11■■□□□ 1.93
LRRTM4Q86VH4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
LRRTM4Q86VH4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
LRRTM4Q86VH4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
LRRTM4Q86VH4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LRRTM4Q86VH4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.08■■□□□ 1.93
LRRTM4Q86VH4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.08■■□□□ 1.93
LRRTM4Q86VH4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.07■■□□□ 1.92
LRRTM4Q86VH4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.06■■□□□ 1.92
LRRTM4Q86VH4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
LRRTM4Q86VH4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
LRRTM4Q86VH4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
LRRTM4Q86VH4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.05■■□□□ 1.92
LRRTM4Q86VH4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LRRTM4Q86VH4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
LRRTM4Q86VH4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
LRRTM4Q86VH4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
LRRTM4Q86VH4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.92
LRRTM4Q86VH4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.01■■□□□ 1.91
LRRTM4Q86VH4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
LRRTM4Q86VH4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRRTM4Q86VH4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27■■□□□ 1.91
LRRTM4Q86VH4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRRTM4Q86VH4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LRRTM4Q86VH4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LRRTM4Q86VH4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.97■■□□□ 1.91
LRRTM4Q86VH4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRTM4Q86VH4 CAHM-201ENST00000604200 896 ntBASIC26.95■■□□□ 1.9
LRRTM4Q86VH4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LRRTM4Q86VH4 AL391121.1-201ENST00000607967 1349 ntBASIC26.92■■□□□ 1.9
LRRTM4Q86VH4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.92■■□□□ 1.9
LRRTM4Q86VH4 SUZ12P1-203ENST00000578195 985 ntBASIC26.92■■□□□ 1.9
LRRTM4Q86VH4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LRRTM4Q86VH4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
LRRTM4Q86VH4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.91■■□□□ 1.9
LRRTM4Q86VH4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LRRTM4Q86VH4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.9■■□□□ 1.9
LRRTM4Q86VH4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LRRTM4Q86VH4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LRRTM4Q86VH4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LRRTM4Q86VH4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LRRTM4Q86VH4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LRRTM4Q86VH4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.85■■□□□ 1.89
LRRTM4Q86VH4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
LRRTM4Q86VH4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LRRTM4Q86VH4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LRRTM4Q86VH4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
LRRTM4Q86VH4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.83■■□□□ 1.89
LRRTM4Q86VH4 WASH5P-204ENST00000632292 975 ntBASIC26.83■■□□□ 1.89
LRRTM4Q86VH4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LRRTM4Q86VH4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LRRTM4Q86VH4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LRRTM4Q86VH4 AC120057.4-201ENST00000624722 1615 ntBASIC26.8■■□□□ 1.88
LRRTM4Q86VH4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LRRTM4Q86VH4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.8■■□□□ 1.88
LRRTM4Q86VH4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LRRTM4Q86VH4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms