Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCA10Q71F78 SHF-206ENST00000560471 2499 ntTSL 5 BASIC14.89□□□□□ -0.03
LCA10Q71F78 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LCA10Q71F78 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC14.86□□□□□ -0.03
LCA10Q71F78 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCA10Q71F78 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCA10Q71F78 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LCA10Q71F78 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LCA10Q71F78 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
LCA10Q71F78 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LCA10Q71F78 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LCA10Q71F78 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LCA10Q71F78 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCA10Q71F78 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LCA10Q71F78 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LCA10Q71F78 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCA10Q71F78 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LCA10Q71F78 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LCA10Q71F78 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC14.78□□□□□ -0.04
LCA10Q71F78 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC14.78□□□□□ -0.04
LCA10Q71F78 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCA10Q71F78 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LCA10Q71F78 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LCA10Q71F78 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCA10Q71F78 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCA10Q71F78 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCA10Q71F78 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCA10Q71F78 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCA10Q71F78 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LCA10Q71F78 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCA10Q71F78 ILK-212ENST00000532063 1617 ntTSL 2 BASIC14.74□□□□□ -0.05
LCA10Q71F78 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC14.74□□□□□ -0.05
LCA10Q71F78 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LCA10Q71F78 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCA10Q71F78 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LCA10Q71F78 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC14.73□□□□□ -0.05
LCA10Q71F78 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCA10Q71F78 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCA10Q71F78 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC14.72□□□□□ -0.05
LCA10Q71F78 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LCA10Q71F78 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LCA10Q71F78 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LCA10Q71F78 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCA10Q71F78 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCA10Q71F78 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCA10Q71F78 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LCA10Q71F78 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
LCA10Q71F78 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LCA10Q71F78 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LCA10Q71F78 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
LCA10Q71F78 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCA10Q71F78 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCA10Q71F78 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
LCA10Q71F78 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCA10Q71F78 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCA10Q71F78 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCA10Q71F78 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.67□□□□□ -0.06
LCA10Q71F78 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC14.67□□□□□ -0.06
LCA10Q71F78 ABCB10P3-201ENST00000561950 2166 ntBASIC14.67□□□□□ -0.06
LCA10Q71F78 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCA10Q71F78 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCA10Q71F78 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.65□□□□□ -0.06
LCA10Q71F78 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC14.65□□□□□ -0.06
LCA10Q71F78 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCA10Q71F78 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCA10Q71F78 SNAI3-AS1-204ENST00000567997 2048 ntBASIC14.65□□□□□ -0.06
LCA10Q71F78 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC14.64□□□□□ -0.07
LCA10Q71F78 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LCA10Q71F78 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
LCA10Q71F78 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCA10Q71F78 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCA10Q71F78 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LCA10Q71F78 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCA10Q71F78 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCA10Q71F78 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCA10Q71F78 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LCA10Q71F78 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LCA10Q71F78 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LCA10Q71F78 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LCA10Q71F78 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LCA10Q71F78 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCA10Q71F78 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LCA10Q71F78 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC14.57□□□□□ -0.08
LCA10Q71F78 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.57□□□□□ -0.08
LCA10Q71F78 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LCA10Q71F78 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCA10Q71F78 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCA10Q71F78 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LCA10Q71F78 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LCA10Q71F78 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCA10Q71F78 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCA10Q71F78 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCA10Q71F78 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCA10Q71F78 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCA10Q71F78 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LCA10Q71F78 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCA10Q71F78 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCA10Q71F78 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCA10Q71F78 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LCA10Q71F78 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms